2D-IR spectroscopy: ultrafast insights into biomolecule structure and function

被引:140
作者
Hunt, Neil T. [1 ]
机构
[1] Univ Strathclyde, Dept Phys, SUPA, Glasgow G4 0NG, Lanark, Scotland
基金
英国工程与自然科学研究理事会; 欧洲研究理事会;
关键词
2-DIMENSIONAL INFRARED-SPECTROSCOPY; 2D IR SPECTROSCOPY; VIBRATIONAL ECHO SPECTROSCOPY; ISLET AMYLOID POLYPEPTIDE; HYDROGEN-BOND; SECONDARY STRUCTURE; ALPHA-HELIX; DYNAMICS; PEPTIDES; ISOTOPOMERS;
D O I
10.1039/b819181f
中图分类号
O6 [化学];
学科分类号
0703 ;
摘要
Ultrafast 2D-IR spectroscopy is rapidly becoming a valuable tool for examining the relationship between structure and function of biomolecules. The unique combination of molecular-level structural information and ultrafast time resolution gives previously inaccessible insights relating to the rapid structural fluctuations, vibrational dynamics and solvent-solute interactions of proteins, all of which have important implications for the biological function of these species. In this tutorial review, the method and development of ultrafast 2D-IR spectroscopy is discussed, including an introduction to the two main experimental approaches, double resonance and photon echo 2D-IR, and the extension of the technique to non-equilibrium or transient 2D-IR measurements. The scope of the new information available through 2D-IR spectroscopy is then demonstrated by reference to the current state of the art of 2D-IR studies of molecules of biological interest.
引用
收藏
页码:1837 / 1848
页数:12
相关论文
共 46 条
[1]   Two-dimensional infrared spectroscopy of peptides by phase-controlled femtosecond vibrational photon echoes [J].
Asplund, MC ;
Zanni, MT ;
Hochstrasser, RM .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 2000, 97 (15) :8219-8224
[2]   Transient two-dimensional infrared spectroscopy: Exploring the polarization dependence [J].
Bredenbeck, J ;
Helbing, J ;
Hamm, P .
JOURNAL OF CHEMICAL PHYSICS, 2004, 121 (12) :5943-5957
[3]   Labeling vibrations by light: Ultrafast transient 2D-IR spectroscopy tracks vibrational modes during photoinduced charge transfer [J].
Bredenbeck, J ;
Helbing, J ;
Hamm, P .
JOURNAL OF THE AMERICAN CHEMICAL SOCIETY, 2004, 126 (04) :990-991
[4]   Transient 2D-IR spectroscopy: Snapshots of the nonequilibrium ensemble during the picosecond conformational transition of a small peptide [J].
Bredenbeck, J ;
Helbing, J ;
Behrendt, R ;
Renner, C ;
Moroder, L ;
Wachtveitl, J ;
Hamm, P .
JOURNAL OF PHYSICAL CHEMISTRY B, 2003, 107 (33) :8654-8660
[5]   Ultrafast 2D-IR Spectroscopy of transient species [J].
Bredenbeck, Jens ;
Helbing, Jan ;
Kolano, Christoph ;
Hamm, Peter .
CHEMPHYSCHEM, 2007, 8 (12) :1747-1756
[6]   Protein ligand migration mapped by nonequilibrium 2D-IR exchange spectroscopy [J].
Bredenbeck, Jens ;
Helbing, Jan ;
Nienhaus, Karin ;
Nienhaus, G. Ulrich ;
Hamm, Peter .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 2007, 104 (36) :14243-14248
[7]   Double-resonance versus pulsed Fourier transform two-dimensional infrared spectroscopy: An experimental and theoretical comparison [J].
Cervetto, V ;
Helbing, J ;
Bredenbeck, J ;
Hamm, P .
JOURNAL OF CHEMICAL PHYSICS, 2004, 121 (12) :5935-5942
[8]   Transient two-dimensional IR spectrometer for probing nanosecond temperature-jump kinetics [J].
Chung, Hoi Sung ;
Khalil, Munira ;
Smith, Adam W. ;
Tokmakoff, Andrei .
REVIEW OF SCIENTIFIC INSTRUMENTS, 2007, 78 (06)
[9]   Transient 2D IR spectroscopy of ubiquitin unfolding dynamics [J].
Chung, Hoi Sung ;
Ganim, Ziad ;
Jones, Kevin C. ;
Tokmakoff, Andrei .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 2007, 104 (36) :14237-14242
[10]   Single-shot two-dimensional infrared spectroscopy [J].
DeCamp, Matthew F. ;
DeFlores, Lauren P. ;
Jones, Kevin C. ;
Tokmakoff, Andrei .
OPTICS EXPRESS, 2007, 15 (01) :233-241