Progenitor "Mycobacterium canettii" Clone Responsible for Lymph Node Tuberculosis Epidemic, Djibouti

被引:54
作者
Blouin, Yann [1 ,2 ]
Cazajous, Geraldine
Dehan, Celine
Soler, Charles [3 ]
Vong, Rithy [3 ]
Hassan, Mohamed Osman
Hauck, Yolande [1 ,2 ]
Boulais, Christian
Andriamanantena, Dina [4 ]
Martinaud, Christophe [3 ]
Martin, Emilie [5 ]
Pourcel, Christine [1 ,2 ]
Vergnaud, Gilles [1 ,2 ,6 ]
机构
[1] Univ Paris 11, F-91405 Orsay, France
[2] CNRS, F-91405 Orsay, France
[3] Hop Instruct Armees Percy, Clamart, France
[4] Hop Instruct Armees Begin, St Mande, France
[5] Ctr Hosp Lyon Sud, Lyon, France
[6] Inst Rech Biomed Armees, Bretigny Sur Orge, France
关键词
COMPLEX; EVOLUTION; ORIGIN;
D O I
10.3201/eid2001.130652
中图分类号
R392 [医学免疫学]; Q939.91 [免疫学];
学科分类号
100102 ;
摘要
"Mycobacterium canettii" an opportunistic human pathogen living in an unknown environmental reservoir, is the progenitor species from which Mycobacterium tuberculosis emerged. Since its discovery in 1969, most of the approximate to 70 known M. canettii strains were isolated in the Republic of Djibouti, frequently from expatriate children and adults. We show here, by whole-genome sequencing, that most strains collected from February 2010 through March 2013, and associated with 2 outbreaks of lymph node tuberculosis in children, belong to a unique epidemic clone within M. canettii. Evolution of this clone, which has been recovered regularly since 1983, may mimic the birth of M. tuberculosis. Thus, recognizing this organism and identifying its reservoir are clinically important.
引用
收藏
页码:21 / 28
页数:8
相关论文
共 24 条
[1]   Significance of the Identification in the Horn of Africa of an Exceptionally Deep Branching Mycobacterium tuberculosis Clade [J].
Blouin, Yann ;
Hauck, Yolande ;
Soler, Charles ;
Fabre, Michel ;
Vong, Rithy ;
Dehan, Celine ;
Cazajous, Geraldine ;
Massoure, Pierre-Laurent ;
Kraemer, Philippe ;
Jenkins, Akinbowale ;
Garnotel, Eric ;
Pourcel, Christine ;
Vergnaud, Gilles .
PLOS ONE, 2012, 7 (12)
[2]   The Impact of Recombination on dN/dS within Recently Emerged Bacterial Clones [J].
Castillo-Ramirez, Santiago ;
Harris, Simon R. ;
Holden, Matthew T. G. ;
He, Miao ;
Parkhill, Julian ;
Bentley, Stephen D. ;
Feil, Edward J. .
PLOS PATHOGENS, 2011, 7 (07)
[3]   Human T cell epitopes of Mycobacterium tuberculosis are evolutionarily hyperconserved [J].
Comas, Inaki ;
Chakravartti, Jaidip ;
Small, Peter M. ;
Galagan, James ;
Niemann, Stefan ;
Kremer, Kristin ;
Ernst, Joel D. ;
Gagneux, Sebastien .
NATURE GENETICS, 2010, 42 (06) :498-U41
[4]   Rapid Pneumococcal Evolution in Response to Clinical Interventions [J].
Croucher, Nicholas J. ;
Harris, Simon R. ;
Fraser, Christophe ;
Quail, Michael A. ;
Burton, John ;
van der Linden, Mark ;
McGee, Lesley ;
von Gottberg, Anne ;
Song, Jae Hoon ;
Ko, Kwan Soo ;
Pichon, Bruno ;
Baker, Stephen ;
Parry, Christopher M. ;
Lambertsen, Lotte M. ;
Shahinas, Dea ;
Pillai, Dylan R. ;
Mitchell, Timothy J. ;
Dougan, Gordon ;
Tomasz, Alexander ;
Klugman, Keith P. ;
Parkhill, Julian ;
Hanage, William P. ;
Bentley, Stephen D. .
SCIENCE, 2011, 331 (6016) :430-434
[5]   Insight into Microevolution of Yersinia pestis by Clustered Regularly Interspaced Short Palindromic Repeats [J].
Cui, Yujun ;
Li, Yanjun ;
Gorge, Olivier ;
Platonov, Mikhail E. ;
Yan, Yanfeng ;
Guo, Zhaobiao ;
Pourcel, Christine ;
Dentovskaya, Svetlana V. ;
Balakhonov, Sergey V. ;
Wang, Xiaoyi ;
Song, Yajun ;
Anisimov, Andrey P. ;
Vergnaud, Gilles ;
Yang, Ruifu .
PLOS ONE, 2008, 3 (07)
[6]   High genetic diversity revealed by variable-number tandem repeat genotyping and analysis of hsp65 gene polymorphism in a large collection of "Mycobacterium canettii" strains indicates that the M-tuberculosis complex is a recently emerged clone of "M-canettii" [J].
Fabre, M ;
Koeck, JL ;
Le Flèche, P ;
Simon, F ;
Hervé, V ;
Vergnaud, G ;
Pourcel, C .
JOURNAL OF CLINICAL MICROBIOLOGY, 2004, 42 (07) :3248-3255
[7]   Molecular characteristics of "Mycobacterium canettii" the smooth Mycobacterium tuberculosis bacilli [J].
Fabre, Michel ;
Hauck, Yolande ;
Soler, Charles ;
Koeck, Jean-Louis ;
van Ingen, Jakko ;
van Soolingen, Dick ;
Vergnaud, Gilles ;
Pourcel, Christine .
INFECTION GENETICS AND EVOLUTION, 2010, 10 (08) :1165-1173
[8]   Mycobacterium canettii is intrinsically resistant to both pyrazinamide and pyrazinoic acid [J].
Feuerriegel, Silke ;
Koeser, Claudio U. ;
Richter, Elvira ;
Niemann, Stefan .
JOURNAL OF ANTIMICROBIAL CHEMOTHERAPY, 2013, 68 (06) :1439-1440
[9]   Current Diagnosis and Management of Peripheral Tuberculous Lymphadenitis [J].
Fontanilla, Jose-Mario ;
Barnes, Arti ;
von Reyn, C. Fordham .
CLINICAL INFECTIOUS DISEASES, 2011, 53 (06) :555-562
[10]   Whole-Genome Sequencing and Social-Network Analysis of a Tuberculosis Outbreak [J].
Gardy, Jennifer L. ;
Johnston, James C. ;
Sui, Shannan J. Ho ;
Cook, Victoria J. ;
Shah, Lena ;
Brodkin, Elizabeth ;
Rempel, Shirley ;
Moore, Richard ;
Zhao, Yongjun ;
Holt, Robert ;
Varhol, Richard ;
Birol, Inanc ;
Lem, Marcus ;
Sharma, Meenu K. ;
Elwood, Kevin ;
Jones, Steven J. M. ;
Brinkman, Fiona S. L. ;
Brunham, Robert C. ;
Tang, Patrick .
NEW ENGLAND JOURNAL OF MEDICINE, 2011, 364 (08) :730-739