Depth-Specific Distribution of the SAR116 Phages Revealed by Virome Binning

被引：4

作者：

Kang, Ilnam ^{[1
]}

Cho, Jang-Cheon ^{[1
]}

机构：

[1] Inha Univ, Dept Biol Sci, Inchon 402751, South Korea

来源：

JOURNAL OF MICROBIOLOGY AND BIOTECHNOLOGY | 2014年 / 24卷 / 05期

基金：

新加坡国家研究基金会;

关键词：

SAR116; Candidatus Puniceispirillum marinum" strain IMCC1322; marine virus; HMO-2011; viral metagenome; metagenome binning; CALIFORNIA CURRENT SYSTEM; PACIFIC SUBTROPICAL GYRE; OCEAN; GENOME; COMMUNITIES; MONTEREY; PATTERNS; CLADE;

D O I：

10.4014/jmb.1312.12062

中图分类号：

Q81 [生物工程学（生物技术）]; Q93 [微生物学];

学科分类号：

071005 ; 0836 ; 090102 ; 100705 ;

摘要：

HMO-2011, a recently isolated lytic phage that infects the SAR116 bacterial clade, represents one of the most abundant phage types in the oceans. In this study, the HMO-2011 genome sequence was compared with virome sequences obtained from various depths of the Pacific Ocean regions using metagenome binning. HMO-2011 was confirmed to be one of the most highly assigned viruses, with a maximum of 7.6% of total reads assigned. The HMO-2011-type phages demonstrated a depth-specific distribution, showing more abundance in the euphotic zone of coastal, transition, and open ocean regions as compared with the dark ocean.

引用

收藏

页码：592 / 596

页数：5

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