The complete genome sequence of a divergent grapevine virus I isolate naturally infecting grapevine in Greece

被引:4
|
作者
Lotos, L. [1 ]
Ruiz-Garcia, A. B. [2 ]
Panailidou, P. [1 ]
Olmos, A. [2 ]
Katis, N., I [1 ]
Maliogka, V., I [1 ]
机构
[1] Aristotle Univ Thessaloniki, Fac Agr Forestry & Nat Environm, Sch Agr, Lab Plant Pathol, Thessaloniki 54124, Greece
[2] Inst Valenciano Invest Agr, Valencia 46113, Spain
基金
欧盟地平线“2020”;
关键词
1ST REPORT; VITIVIRUS;
D O I
10.1007/s00705-020-04762-9
中图分类号
Q93 [微生物学];
学科分类号
071005 ; 100705 ;
摘要
A significant number of new members of the genusVitivirushave been identified recently, mainly due to the advent of high-throughput sequencing (HTS). Grapevine virus I (GVI), which was identified in New Zealand in 2018, is one of these viruses. RNAseq HTS analysis of a Greek grapevine (cv. Daphnia), revealed the presence of a GVI-like isolate (D2-1/19). Sequence analysis confirmed the classification of D2-1/19 as GVI. However, both sequence and phylogenetic data exhibited high levels of variability between D2-1/19 and the previously characterized GVI isolates. This study provides the full-length sequence of a divergent GVI isolate, adding knowledge to the limited information available about this recently identified virus.
引用
收藏
页码:3003 / 3006
页数:4
相关论文
共 50 条
  • [21] COMPLETE NUCLEOTIDE SEQUENCE OF A NEW ISOLATE OF GRAPEVINE VIRUS B FROM CHINA
    Hu, G. J.
    Dong, Y. F.
    Zhang, Z. P.
    Fan, X. D.
    Ren, F.
    Zhu, H. J.
    JOURNAL OF PLANT PATHOLOGY, 2014, 96 (02) : 403 - 406
  • [22] Complete nucleotide sequence of the RNA 1 of a grapevine isolate of Arabis mosaic virus
    T. Wetzel
    A. Beck
    U. Wegener
    G. Krczal
    Archives of Virology, 2004, 149 : 989 - 995
  • [23] Complete nucleotide sequence of an isolate of the nepovirus raspberry ringspot virus from grapevine
    Ebel, R
    Schnabel, A
    Reustle, GM
    Krczal, G
    Wetzel, T
    VIRUS RESEARCH, 2003, 97 (02) : 141 - 144
  • [24] Complete nucleotide sequence and genome organisation of grapevine Bulgarian latent virus
    Toufic Elbeaino
    Michele Digiaro
    Frida Fallanaj
    Slobodan Kuzmanovic
    Giovanni Paolo Martelli
    Archives of Virology, 2011, 156 : 875 - 879
  • [25] Complete nucleotide sequence and genome organisation of grapevine Bulgarian latent virus
    Elbeaino, Toufic
    Digiaro, Michele
    Fallanaj, Frida
    Kuzmanovic, Slobodan
    Martelli, Giovanni Paolo
    ARCHIVES OF VIROLOGY, 2011, 156 (05) : 875 - 879
  • [26] Complete Genome Sequence of a New Circular DNA Virus from Grapevine
    Krenz, Bjorn
    Thompson, Jeremy R.
    Fuchs, Marc
    Perry, Keith L.
    JOURNAL OF VIROLOGY, 2012, 86 (14) : 7715 - 7715
  • [27] Complete genome sequence of a divergent sweet potato chlorotic stunt virus isolate infecting Calystegia hederacea in China
    Liu, Huihua
    Zhao, Fumei
    Qiao, Qi
    Zhang, Desheng
    Wang, Yongjiang
    Wang, Shuang
    Tian, Yuting
    Zhang, Zhenchen
    ARCHIVES OF VIROLOGY, 2021, 166 (07) : 2037 - 2040
  • [28] Complete genome sequence of a divergent sweet potato chlorotic stunt virus isolate infecting Calystegia hederacea in China
    Huihua Liu
    Fumei Zhao
    Qi Qiao
    Desheng Zhang
    Yongjiang Wang
    Shuang Wang
    Yuting Tian
    Zhenchen Zhang
    Archives of Virology, 2021, 166 : 2037 - 2040
  • [29] Characterization of a naturally occurring recombinant isolate of Grapevine fanleaf virus
    E. Vigne
    G. Demangeat
    V. Komar
    M. Fuchs
    Archives of Virology, 2005, 150 : 2241 - 2255
  • [30] Characterization of a naturally occurring recombinant isolate of Grapevine fanleaf virus
    Vigne, E
    Demangeat, G
    Komar, V
    Fuchs, M
    ARCHIVES OF VIROLOGY, 2005, 150 (11) : 2241 - 2255