Integration of multiple "OMIC" biomarkers: A precision medicine strategy for lung cancer

被引:46
作者
Robles, Ana I. [1 ]
Harris, Curtis C. [1 ]
机构
[1] NCI, Lab Human Carcinogenesis, NIH, Bethesda, MD 20892 USA
关键词
Low-dose computed tomography; Cytokine; Metabolomics; Methylation; Gene expression; MicroRNA; BRONCHIAL GENOMIC CLASSIFIER; PRACTICAL MOLECULAR ASSAY; SQUAMOUS-CELL-CARCINOMA; GENE-EXPRESSION; PROGNOSTIC CLASSIFIER; ANALYTICAL VALIDATION; MASS-SPECTROMETRY; CLINICAL UTILITY; RISK; SIGNATURE;
D O I
10.1016/j.lungcan.2016.06.003
中图分类号
R73 [肿瘤学];
学科分类号
100214 ;
摘要
More than half of all new lung cancer diagnoses are made in patients with locally advanced or metastatic disease, at which point therapeutic options are scarce. It is anticipated, however, that the widespread use of Low-Dose Computed Tomography (LDCT) screening, will lead to a greater proportion of lung cancers being diagnosed at an early, operable, stage. Still, the overall rate of recurrence for surgically treated Stage I lung cancer patients is up to 30% within 5 years of diagnosis. Thus, the identification and clinical application of biomarkers of early stage lung cancer are a pressing medical need. The integrative analysis of "omic," clinical and epidemiological data for single patients is a core principle of precision medicine. Through rigorous bioinformatics and statistical analyses we have identified biomarkers of early-stage lung cancer based on DNA methylation, expression of mRNA and miRNA, inflammatory cytokines, and urinary metabolites. Beyond a more comprehensive understanding of the molecular taxonomy of lung cancer, these biomarkers can have very practical implications in the context of unmet clinical needs of early stage lung cancer patients: First, current guidelines for LDCT screening broadly include individuals based on age and history of heavy smoking. Tumor-derived circulating biomarkers in the blood and urine associated with lung cancer risk could narrow and prioritize individuals for LDCT screening. Second, a high number of nodules are identified by LDCT, of which fewer than 5% are finally diagnosed as lung cancer. Biomarkers may help discriminate malignant nodules from benign or indolent lesions. Third, the expected rise in the numbers of lung cancer patients diagnosed at an early stage will necessitate new treatment options. Circulating, urinary and tissue-based biomarkers that molecularly categorize Stage I patients after tumor resection can help identify high-risk patients who may benefit from adjuvant chemotherapy or innovative immunotherapy regimens. Published by Elsevier Ireland Ltd.
引用
收藏
页码:50 / 58
页数:9
相关论文
共 80 条
[1]   Reduced Lung-Cancer Mortality with Low-Dose Computed Tomographic Screening [J].
Aberle, Denise R. ;
Adams, Amanda M. ;
Berg, Christine D. ;
Black, William C. ;
Clapp, Jonathan D. ;
Fagerstrom, Richard M. ;
Gareen, Ilana F. ;
Gatsonis, Constantine ;
Marcus, Pamela M. ;
Sicks, JoRean D. .
NEW ENGLAND JOURNAL OF MEDICINE, 2011, 365 (05) :395-409
[2]   Decoding tumour phenotype by noninvasive imaging using a quantitative radiomics approach [J].
Aerts, Hugo J. W. L. ;
Velazquez, Emmanuel Rios ;
Leijenaar, Ralph T. H. ;
Parmar, Chintan ;
Grossmann, Patrick ;
Cavalho, Sara ;
Bussink, Johan ;
Monshouwer, Rene ;
Haibe-Kains, Benjamin ;
Rietveld, Derek ;
Hoebers, Frank ;
Rietbergen, Michelle M. ;
Leemans, C. Rene ;
Dekker, Andre ;
Quackenbush, John ;
Gillies, Robert J. ;
Lambin, Philippe .
NATURE COMMUNICATIONS, 2014, 5
[3]   Combination of Protein Coding and Noncoding Gene Expression as a Robust Prognostic Classifier in Stage I Lung Adenocarcinoma [J].
Akagi, Ichiro ;
Okayama, Hirokazu ;
Schetter, Aaron J. ;
Robles, Ana I. ;
Kohno, Takashi ;
Bowman, Elise D. ;
Kazandjian, Dickran ;
Welsh, Judith A. ;
Oue, Naohide ;
Saito, Motonobu ;
Miyashita, Masao ;
Uchida, Eiji ;
Takizawa, Toshihiro ;
Takenoshita, Seiichi ;
Skaug, Vidar ;
Mollerup, Steen ;
Haugen, Aage ;
Yokota, Jun ;
Harris, Curtis C. .
CANCER RESEARCH, 2013, 73 (13) :3821-3832
[4]  
[Anonymous], AM THORAC SOC
[5]  
[Anonymous], 2015, J NATL CANC I
[6]  
[Anonymous], J NATL CANC I
[7]  
[Anonymous], 2011, PRECISION MED BUILDI
[8]  
[Anonymous], 2014, Centers for Disease Control and Prevention
[9]   Benefits and Harms of CT Screening for Lung Cancer A Systematic Review [J].
Bach, Peter B. ;
Mirkin, Joshua N. ;
Oliver, Thomas K. ;
Azzoli, Christopher G. ;
Berry, Donald A. ;
Brawley, Otis W. ;
Byers, Tim ;
Colditz, Graham A. ;
Gould, Michael K. ;
Jett, James R. ;
Sabichi, Anita L. ;
Smith-Bindman, Rebecca ;
Wood, Douglas E. ;
Qaseem, Amir ;
Detterbeck, Frank C. .
JAMA-JOURNAL OF THE AMERICAN MEDICAL ASSOCIATION, 2012, 307 (22) :2418-2429
[10]   A serum circulating miRNA diagnostic test to identify asymptomatic high-risk individuals with early stage lung cancer [J].
Bianchi, Fabrizio ;
Nicassio, Francesco ;
Marzi, Matteo ;
Belloni, Elena ;
Dall'Olio, Valentina ;
Bernard, Loris ;
Pelosi, Giuseppe ;
Maisonneuve, Patrick ;
Veronesi, Giulia ;
Di Fiore, Pier Paolo .
EMBO MOLECULAR MEDICINE, 2011, 3 (08) :495-503