Algoriphagus aestuarii sp nov., a member of the Cyclobacteriaceae isolated from a tidal-flat sediment of the Yellow Sea in Korea

被引:10
作者
Jung, Yong-Taek [1 ,2 ]
Lee, Jung-Sook [3 ]
Yoon, Jung-Hoon [1 ]
机构
[1] Sungkyunkwan Univ, Dept Food Sci & Biotechnol, Suwon, South Korea
[2] Univ Sci & Technol, Taejon, South Korea
[3] Korea Res Inst Biosci & Biotechnol, Taejon, South Korea
关键词
BACTERIAL SYSTEMATICS; COMB; NOV; WATER; IDENTIFICATION; SEAWATER; STRAINS; ALGAE; SOIL;
D O I
10.1099/ijsem.0.000434
中图分类号
Q93 [微生物学];
学科分类号
071005 ; 100705 ;
摘要
A Gram-strain-negative, coccoid or oval-shaped, non-motile bacterial strain, designated MDM-1(T), Was isolated from a tidal-flat sediment on the Korean peninsula. Strain MDM-1(T) was found to grow optimally at pH 7.0-8.0, at 30 degrees C and in the presence of 2-3 % (w/v) NaCl. A neighbour-joining phylogenetic tree based on 16S rRNA gene sequences showed that strain MDM-1(T) falls within the clade comprising species of the genus Algoriphagus, clustering with the type strains of Algoriphagus halophilus, A. lutimaris, A. chungangensis and A. machipongonensis, with which it exhibited 97.2-98.5 % 16S rRNA gene sequence similarity. Sequence similarities to the type strains of the other recognized species of the genus Algoriphagus were 92.8-97.6 %. Strain MDM-1(T) was found to contain MK-7 as the predominant menaquinone and iso-C-15:0 and summed feature 3 (C-16:1 omega 6c and/or C-16:1 omega 7c) as the major fatty acids. The major polar lipids were identified as phosphatidylcholine, phosphatidylethanolamine and two unidentified lipids. The DNA G+C content of strain MDM-1(T) Was determined to be 42.7 mol% and the mean DNA DNA relatedness with A. halophilus KCTC 12051(T), A. lutimaris S1-3(T), A. chungangensis KCTC 23759(T), A. machipongonensis DSM 24695(T) and A. ratkowskyi ClP 107452(T) was 19.7-5.2 %. Differential phenotypic properties, together with the phylogenetic and genetic distinctiveness, revealed that strain MDM-1(T) is distinguishable from recognized species of the genus Algoriphagus. On the basis of the data presented, strain MDM-1(T) IS proposed to represent a novel species of the genus Algoriphagus, for which the name Algoriphagus aestuarii sp. nov. is proposed. The type strain is MDM-1(T) (= KCTC 42199(T)=NBRC 110552(T)).
引用
收藏
页码:3439 / 3446
页数:8
相关论文
共 37 条
[1]   Algoriphagus machipongonensis sp nov., co-isolated with a colonial choanoflagellate [J].
Alegado, Rosanna A. ;
Grabenstatter, Jonathan D. ;
Zuzow, Richard ;
Morris, Andrea ;
Huang, Sherri Y. ;
Summons, Roger E. ;
King, Nicole .
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY, 2013, 63 :163-168
[2]  
Barrow GI., 1993, COWAN STEELS MANUAL, V3th
[3]  
Baumann P., 1981, The prokaryotes, P1302
[4]   Description of Cellulophaga algicola sp nov., isolated from the surfaces of Antarctic algae, and reclassification of Cytophaga uliginosa (ZoBell and Upham 1944) Reichenbach 1989 as Cellulophaga uliginosa comb. nov. [J].
Bowman, JP .
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY, 2000, 50 :1861-1868
[5]   Algoriphagus ratkowskyi gen. nov., sp nov., Brumimicrobium glaciale gen. nov., sp nov., Cryomorpha ignava gen. nov., sp nov and Crocinitomix catalasitica gen. nov., sp nov., novel flavobacteria isolated from various polar habitats [J].
Bowman, JP ;
Mancuso, C ;
Nichols, CM ;
Gibson, JAE .
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY, 2003, 53 :1343-1355
[6]   Muricauda ruestringensis gen. nov., sp nov., a facultatively anaerobic, appendaged bacterium from German North Sea intertidal sediment [J].
Bruns, A ;
Rohde, M ;
Berthe-Corti, L .
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY, 2001, 51 :1997-2006
[7]   KINETIC STUDIES OF PIGMENT SYNTHESIS BY NON-SULFUR PURPLE BACTERIA [J].
COHENBAZIRE, G ;
SISTROM, WR ;
STANIER, RY .
JOURNAL OF CELLULAR AND COMPARATIVE PHYSIOLOGY, 1957, 49 (01) :25-68
[8]   FLUOROMETRIC DEOXYRIBONUCLEIC ACID DEOXYRIBONUCLEIC ACID HYBRIDIZATION IN MICRODILUTION WELLS AS AN ALTERNATIVE TO MEMBRANE-FILTER HYBRIDIZATION IN WHICH RADIOISOTOPES ARE USED TO DETERMINE GENETIC RELATEDNESS AMONG BACTERIAL STRAINS [J].
EZAKI, T ;
HASHIMOTO, Y ;
YABUUCHI, E .
INTERNATIONAL JOURNAL OF SYSTEMATIC BACTERIOLOGY, 1989, 39 (03) :224-229
[9]   Algoriphagus chungangensis sp nov., isolated from a tidal flat sediment [J].
Kang, Hyeonji ;
Weerawongwiwat, Veeraya ;
Jung, Min Young ;
Myung, Soon Chul ;
Kim, Wonyong .
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY, 2013, 63 :648-653
[10]   Algoriphagus taeanensis sp nova, isolated from a tidal flat, and emended description of Algoriphagus hitonicola [J].
Kim, Haneul ;
Joung, Yochan ;
Joh, Kiseong .
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY, 2014, 64 :21-26