Genetic diversity in the physic nut based on ISSR markers

被引:3
作者
Ribeiro Araujo, Linda Brenna [1 ]
Barroso Neto, Antonio Moreira [1 ]
Alves Pires, Katia Regina [2 ]
Campos de Magalhaes Bertini, Candida Herminia [1 ,3 ]
机构
[1] Univ Fed Ceara, Programa Posgrad Agron Fitotecn, Fortaleza, CE, Brazil
[2] Univ Fed Ceara, Grad Agron, Fortaleza, CE, Brazil
[3] Univ Fed Ceara, Ctr Ciencias Agr, Fortaleza, CE, Brazil
关键词
Jatropha curcas; molecular markers; genetic diversity; JATROPHA-CURCAS L; MOLECULAR MARKERS; GERMPLASM; PERFORMANCE; SELECTION; RAPD;
D O I
10.31413/nativa.v7i4.6571
中图分类号
S [农业科学];
学科分类号
09 ;
摘要
The use of oleaginous species is an alternative in the growing search for biofuels, where the physic nut (Jatropha curcas) stands out due to its robustness and the quality of its oil. The result is a demand to develop cultivars of this species, and for this, a knowledge of its genetic variability is fundamental. The aim of this study was to evaluate the genetic diversity of 23 accessions of jatropha collected in different regions of Brazil. The DNA of the accessions was extracted and analysed by means of 12 ISSR primers. A genetic dissimilarity matrix was generated from the electrophoretic profiles of the bands and used in elaborating the dendrogram and in grouping the individuals, which was also carried out as per the Tocher method. A Coincidence Index was calculated to check the existence of a relationship between the groups of accessions and their places of collection. A total of 44 bands were amplified, of which 26 were polymorphic (49.08%). The genetic distance between the genotypes ranged from 0.034 to 0.314. The clustering methods resulted in the formation of distinct groups, where three groups were formed by the Tocher Method and seven by the UPGMA. The accessions under study had a narrow genetic base, which could cause difficulties for the process of crop breeding, and lead to greater genetic vulnerability in the new cultivars.
引用
收藏
页码:363 / 370
页数:8
相关论文
共 50 条
[31]   Analysis of genetic diversity among Chinese Cyclocybe chaxingu strains using ISSR and SRAP markers [J].
Liu, Jin-Hao ;
Ding, Fang-Hui ;
Song, Hai-Yan ;
Chen, Ming-Hui ;
Hu, Dian-Ming .
PEERJ, 2022, 10
[32]   Evaluation of genetic diversity in turmeric (Curcuma longa L.) using RAPD and ISSR markers [J].
Singh, Shikha ;
Panda, Manoj Kumar ;
Nayak, Sanghamitra .
INDUSTRIAL CROPS AND PRODUCTS, 2012, 37 (01) :284-291
[33]   Potential of RAPD and ISSR markers for assessing genetic diversity among Stevia rebaudiana Bertoni accessions [J].
Sharma, Neha ;
Kaur, Rajinder ;
Era, Vaidya .
INDIAN JOURNAL OF BIOTECHNOLOGY, 2016, 15 (01) :95-100
[34]   Evaluation of genetic diversity among Jordanian fig germplasm accessions by morphological traits and ISSR markers [J].
Almajali, Dua'a ;
Abdel-Ghani, Adel H. ;
Migdadi, Hussein .
SCIENTIA HORTICULTURAE, 2012, 147 :8-19
[35]   Genetic Diversity in Kenyan Populations of Acacia senegal (L.) Willd. Based on ISSR Markers [J].
Chiveu, C. J. ;
Dangasuk, O. G. ;
Omunyin, M. E. ;
Wachira, F. N. .
SILVAE GENETICA, 2009, 58 (1-2) :20-28
[36]   Study on genetic diversity between Origanum L. species based on genome size and ISSR markers [J].
Jedrzejczyk, Iwona .
INDUSTRIAL CROPS AND PRODUCTS, 2018, 126 :201-207
[37]   Analysis of genetic diversity in the bioenergy crop Miscanthus via ISSR and RAPD markers [J].
Seong, Eun Soo ;
Jeon, Mi Ran ;
Seo, Ji Won ;
Lee, Jae Geun ;
Yu, Chang Yeon .
JOURNAL OF CROP SCIENCE AND BIOTECHNOLOGY, 2022, 25 (04) :373-379
[38]   Genetic diversity in natural populations of Stylosanthes scabra Fabaceae using ISSR markers [J].
Costa, J. C. ;
Fracetto, G. G. M. ;
Fracetto, F. J. C. ;
Souza, T. C. ;
Santos, M. V. F. ;
Lira Junior, M. A. .
GENETICS AND MOLECULAR RESEARCH, 2019, 18 (02)
[39]   The assessment of genetic diversity of Castanea species by RAPD, AFLP, ISSR, and SSR markers [J].
Abdelhamid, Sofiane ;
Le, Cong-Linh ;
Conedera, Marco ;
Kuepfer, Philippe .
TURKISH JOURNAL OF BOTANY, 2014, 38 (05) :835-850
[40]   GENETIC DIVERSITY OF THE ANDEAN TUBER CROP SPECIES ULLUCUS TUBEROSUS AS REVEALED BY MOLECULAR (ISSR) AND MORPHOLOGICAL MARKERS [J].
Malice, Marie ;
Vogt, Carmen Licht Villarroel ;
Pissard, Audrey ;
Arbizu, Carlos ;
Baudoin, Jean-Pierre .
BELGIAN JOURNAL OF BOTANY, 2009, 142 (01) :68-82