Effects of α-tubulin acetylation on microtubule structure and stability

被引:232
作者
Eshun-Wilson, Lisa [1 ]
Zhang, Rui [2 ,9 ]
Portran, Didier [3 ,4 ]
Nachury, Maxence V. [3 ]
Toso, Daniel B. [5 ]
Lohr, Thomas [6 ]
Vendruscolo, Michele [6 ]
Bonomi, Massimiliano [6 ,10 ]
Fraser, James S. [2 ,7 ]
Nogales, Eva [1 ,2 ,5 ,8 ]
机构
[1] Univ Calif Berkeley, Dept Mol & Cell Biol, 229 Stanley Hall, Berkeley, CA 94720 USA
[2] Lawrence Berkeley Natl Lab, Mol Biophys & Integrated Bioimaging Div, Berkeley, CA 94720 USA
[3] Univ Calif San Francisco, Dept Ophthalmol, San Francisco, CA 94158 USA
[4] Univ Montpellier, CNRS, Ctr Biol Cellulaire Montpellier, UMR5237, F-34090 Montpellier, France
[5] Univ Calif Berkeley, Calif Inst Quantitat Biol QB3, Berkeley, CA 94720 USA
[6] Univ Cambridge, Dept Chem, Cambridge CB2 1EW, England
[7] Univ Calif San Francisco, Dept Bioengn & Therapeut Sci, San Francisco, CA 94158 USA
[8] Univ Calif Berkeley, Howard Hughes Med Inst, Berkeley, CA 94720 USA
[9] Washington Univ, Sch Med, Dept Biochem & Mol Biophys, St Louis, MO 63110 USA
[10] CNRS, Inst Pasteur, Struct Bioinformat Unit, UMR 3528, F-75015 Paris, France
基金
美国国家科学基金会;
关键词
cryo-EM; MD; tubulin modifications; microtubule; acetylation; POSTTRANSLATIONAL MODIFICATIONS; DYNAMIC INSTABILITY; BINDING; CELLS; TRANSPORT; SOFTWARE; MODEL; SITE;
D O I
10.1073/pnas.1900441116
中图分类号
O [数理科学和化学]; P [天文学、地球科学]; Q [生物科学]; N [自然科学总论];
学科分类号
07 ; 0710 ; 09 ;
摘要
Acetylation of K40 in alpha-tubulin is the sole posttranslational modification to mark the luminal surface of microtubules. It is still controversial whether its relationship with microtubule stabilization is correlative or causative. We have obtained high-resolution cryo-electron microscopy (cryo-EM) reconstructions of pure samples of alpha TAT1-acetylated and SIRT2-deacetylated microtubules to visualize the structural consequences of this modification and reveal its potential for influencing the larger assembly properties of microtubules. We modeled the conformational ensembles of the unmodified and acetylated states by using the experimental cryo-EM density as a structural restraint in molecular dynamics simulations. We found that acetylation alters the conformational landscape of the flexible loop that contains alpha K40. Modification of alpha K40 reduces the disorder of the loop and restricts the states that it samples. We propose that the change in conformational sampling that we describe, at a location very close to the lateral contacts site, is likely to affect microtubule stability and function.
引用
收藏
页码:10366 / 10371
页数:6
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