Identification of regulators of poly-ADP-ribose polymerase inhibitor response through complementary CRISPR knockout and activation screens

被引:38
作者
Clements, Kristen E. [1 ]
Schleicher, Emily M. [1 ]
Thakar, Tanay [1 ]
Hale, Anastasia [1 ]
Dhoonmoon, Ashna [1 ]
Tolman, Nathanial J. [1 ]
Sharma, Anchal [2 ]
Liang, Xinwen [3 ]
Kawasawa, Yuka Imamura [1 ,4 ,5 ]
Nicolae, Claudia M. [1 ]
Wang, Hong-Gang [3 ,4 ]
De, Subhajyoti [2 ]
Moldovan, George-Lucian [1 ]
机构
[1] Penn State Univ, Dept Biochem & Mol Biol, Coll Med, Hershey, PA 17033 USA
[2] Rutgers State Univ, Rutgers Canc Inst New Jersey, New Brunswick, NJ 08901 USA
[3] Penn State Univ, Dept Pediat, Coll Med, Hershey, PA 17033 USA
[4] Penn State Univ, Dept Pharmacol, Coll Med, Hershey, PA 17033 USA
[5] Penn State Univ, Inst Personalized Med, Coll Med, Hershey, PA 17033 USA
关键词
CYTOMETRY-BASED METHOD; HOMOLOGOUS RECOMBINATION; DAMAGED-CHROMATIN; END RESECTION; MUTANT-CELLS; 53BP1; ACETYLATION; POLY(ADP-RIBOSE); RESISTANCE; TIP60;
D O I
10.1038/s41467-020-19961-w
中图分类号
O [数理科学和化学]; P [天文学、地球科学]; Q [生物科学]; N [自然科学总论];
学科分类号
07 ; 0710 ; 09 ;
摘要
Inhibitors of poly-ADP-ribose polymerase 1 (PARPi) are highly effective in killing cells deficient in homologous recombination (HR); thus, PARPi have been clinically utilized to successfully treat BRCA2-mutant tumors. However, positive response to PARPi is not universal, even among patients with HR-deficiency. Here, we present the results of genome-wide CRISPR knockout and activation screens which reveal genetic determinants of PARPi response in wildtype or BRCA2-knockout cells. Strikingly, we report that depletion of the ubiquitin ligase HUWE1, or the histone acetyltransferase KAT5, top hits from our screens, robustly reverses the PARPi sensitivity caused by BRCA2-deficiency. We identify distinct mechanisms of resistance, in which HUWE1 loss increases RAD51 levels to partially restore HR, whereas KAT5 depletion rewires double strand break repair by promoting 53BP1 binding to double-strand breaks. Our work provides a comprehensive set of putative biomarkers that advance understanding of PARPi response, and identifies novel pathways of PARPi resistance in BRCA2-deficient cells.
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页数:14
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