Long Noncoding RNAs: Emerging Stars in Gene Regulation, Epigenetics and Human Disease

被引:246
作者
Bhan, Arunoday [1 ]
Mandal, Subhrangsu S. [1 ]
机构
[1] Univ Texas Arlington, Dept Chem & Biochem, Epigenet Res Lab, Arlington, TX 76019 USA
基金
美国国家卫生研究院;
关键词
drugs targets; epigenetics; gene regulation; human diseases; long noncoding RNA; noncoding RNA; NATURAL ANTISENSE TRANSCRIPT; PAPILLARY THYROID-CARCINOMA; PROSTATE-SPECIFIC GENE; PROTEIN-CODING RNA; HISTONE METHYLASES; GROWTH-ARREST; CANCER-CELLS; BREAST-CANCER; UP-REGULATION; H19; GENE;
D O I
10.1002/cmdc.201300534
中图分类号
R914 [药物化学];
学科分类号
100701 ;
摘要
Noncoding RNAs (ncRNAs) are classes of transcripts that are encoded by the genome and transcribed but never get translated into proteins. Though not translated into proteins, ncRNAs play pivotal roles in a variety of cellular functions. Here, we review the functions of long noncoding RNAs (lncRNAs) and their implications in various human diseases. Increasing numbers of studies demonstrate that lncRNAs play critical roles in regulation of protein-coding genes, mainte-nance of genomic integrity, dosage compensation, genomic imprinting, mRNA processing, cell differentiation, and development. Misregulation of lncRNAs is associated with a variety of human diseases, including cancer, immune and neurological disorders. Different classes of lncRNAs, their functions, mechanisms of action, and associations with different human diseases are summarized in detail, highlighting their as yet untapped potential in therapy.
引用
收藏
页码:1932 / 1956
页数:25
相关论文
共 286 条
[1]   Senescence-associated lncRNAs: senescence-associated long noncoding RNAs [J].
Abdelmohsen, Kotb ;
Panda, Amaresh ;
Kang, Min-Ju ;
Xu, Jason ;
Selimyan, Roza ;
Yoon, Je-Hyun ;
Martindale, Jennifer L. ;
De, Supriyo ;
Wood, William H., III ;
Becker, Kevin G. ;
Gorospe, Myriam .
AGING CELL, 2013, 12 (05) :890-900
[2]   Long Noncoding RNA, Polycomb, and the Ghosts Haunting INK4b-ARF-INK4a Expression [J].
Aguilo, Francesca ;
Zhou, Ming-Ming ;
Walsh, Martin J. .
CANCER RESEARCH, 2011, 71 (16) :5365-5369
[3]   Complex architecture and regulated expression of the Sox2ot locus during vertebrate development [J].
Amaral, Paulo P. ;
Neyt, Christine ;
Wilkins, Simon J. ;
Askarian-Amiri, Marjan E. ;
Sunkin, Susan M. ;
Perkins, Andrew C. ;
Mattick, John S. .
RNA, 2009, 15 (11) :2013-2027
[4]   Natural antisense transcript of natriuretic peptide precursor A (NPPA): structural organization and modulation of NPPA expression [J].
Annilo, Tarmo ;
Kepp, Katrin ;
Laan, Maris .
BMC MOLECULAR BIOLOGY, 2009, 10
[5]  
[Anonymous], 2008, J NATL CANCER INST M
[6]   Histone methylase MLL1 has critical roles in tumor growth and angiogenesis and its knockdown suppresses tumor growth in vivo [J].
Ansari, K. I. ;
Kasiri, S. ;
Mandal, S. S. .
ONCOGENE, 2013, 32 (28) :3359-3370
[7]   Mixed lineage leukaemia-4 regulates cell-cycle progression and cell viability and its depletion suppresses growth of xenografted tumour in vivo [J].
Ansari, K. I. ;
Kasiri, S. ;
Mishra, B. P. ;
Mandal, S. S. .
BRITISH JOURNAL OF CANCER, 2012, 107 (02) :315-324
[8]   Human CpG binding protein interacts with MLL1, MLL2 and hSet1 and regulates Hox gene expression [J].
Ansari, Khairul I. ;
Mishra, Bibhu P. ;
Maedal, Subhrangsu S. .
BIOCHIMICA ET BIOPHYSICA ACTA-GENE REGULATORY MECHANISMS, 2008, 1779 (01) :66-73
[9]   HOXC10 is overexpressed in breast cancer and transcriptionally regulated by estrogen via involvement of histone methylases MLL3 and MLL4 [J].
Ansari, Khairul I. ;
Hussain, Imran ;
Kasiri, Sahba ;
Mandal, Subhrangsu S. .
JOURNAL OF MOLECULAR ENDOCRINOLOGY, 2012, 48 (01) :61-75
[10]   HOXC6 Is Transcriptionally Regulated via Coordination of MLL Histone Methylase and Estrogen Receptor in an Estrogen Environment [J].
Ansari, Khairul I. ;
Hussain, Imran ;
Shrestha, Bishakha ;
Kasiri, Sahba ;
Mandal, Subhrangsu S. .
JOURNAL OF MOLECULAR BIOLOGY, 2011, 411 (02) :334-349