Discovery of LPMO activity on hemicelluloses shows the importance of oxidative processes in plant cell wall degradation

被引:319
作者
Agger, Jane W. [1 ]
Isaksen, Trine [1 ]
Varnai, Aniko [1 ]
Vidal-Melgosa, Silvia [2 ]
Willats, William G. T. [2 ]
Ludwig, Roland [3 ]
Horn, Svein J. [1 ]
Eijsink, Vincent G. H. [1 ]
Westereng, Bjorge [1 ,2 ,4 ]
机构
[1] Norwegian Univ Life Sci NMBU, Dept Chem Biotechnol & Food Sci, N-1432 As, Norway
[2] Univ Copenhagen, Fac Sci, Dept Plant & Environm Sci, DK-1871 Frederiksberg, Denmark
[3] BOKU Univ Nat Resources & Life Sci, Dept Food Sci & Technol, A-1190 Vienna, Austria
[4] Univ Copenhagen, Fac Sci, Dept Geosci & Nat Resource Management, DK-1958 Frederiksberg C, Denmark
关键词
biorefinery; metallo enzymes; GH61; CBM33; LYTIC POLYSACCHARIDE MONOOXYGENASES; GLYCOSIDE HYDROLASE FAMILY; NEUROSPORA-CRASSA; CELLULOSE; XYLOGLUCAN; OLIGOSACCHARIDES; NOMENCLATURE; HYDROLYSIS; ENDOGLUCANASES; LIGNOCELLULOSE;
D O I
10.1073/pnas.1323629111
中图分类号
O [数理科学和化学]; P [天文学、地球科学]; Q [生物科学]; N [自然科学总论];
学科分类号
07 ; 0710 ; 09 ;
摘要
The recently discovered lytic polysaccharide monooxygenases (LPMOs) are known to carry out oxidative cleavage of glycoside bonds in chitin and cellulose, thus boosting the activity of well-known hydrolytic depolymerizing enzymes. Because biomass-degrading microorganisms tend to produce a plethora of LPMOs, and considering the complexity and copolymeric nature of the plant cell wall, it has been speculated that some LPMOs may act on other substrates, in particular the hemicelluloses that tether to cellulose microfibrils. We demonstrate that an LPMO from Neurospora crassa, NcLPMO9C, indeed degrades various hemicelluloses, in particular xyloglucan. This activity was discovered using a glycan microarray-based screening method for detection of substrate specificities of carbohydrate-active enzymes, and further explored using defined oligomeric hemicelluloses, isolated polymeric hemicelluloses and cell walls. Products generated by NcLPMO9C were analyzed using high performance anion exchange chromatography and multidimensional mass spectrometry. We show that NcLPMO9C generates oxidized products from a variety of substrates and that its product profile differs from those of hydrolytic enzymes acting on the same substrates. The enzyme particularly acts on the glucose backbone of xyloglucan, accepting various substitutions (xylose, galactose) in almost all positions. Because the attachment of xyloglucan to cellulose hampers depolymerization of the latter, it is possible that the beneficial effect of the LPMOs that are present in current commercial cellulase mixtures in part is due to hitherto undetected LPMO activities on recalcitrant hemicellulose structures.
引用
收藏
页码:6287 / 6292
页数:6
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共 42 条
  • [21] STUDIES ON CHEMICAL STRUCTURE OF KONJAC MANNAN .I. ISOLATION AND CHARACTERIZATION OF OLIGOSACCHARIDES FROM PARTIAL ACID HYDROLYZATE OF MANNAN
    KATO, K
    MATSUDA, K
    [J]. AGRICULTURAL AND BIOLOGICAL CHEMISTRY, 1969, 33 (10): : 1446 - &
  • [22] Production of four Neurospora crassa lytic polysaccharide monooxygenases in Pichia pastoris monitored by a fluorimetric assay
    Kittl, Roman
    Kracher, Daniel
    Burgstaller, Daniel
    Haltrich, Dietmar
    Ludwig, Roland
    [J]. BIOTECHNOLOGY FOR BIOFUELS, 2012, 5
  • [23] Structural Basis for Substrate Targeting and Catalysis by Fungal Polysaccharide Monooxygenases
    Li, Xin
    Beeson, William T.
    Phillips, Christopher M.
    Marletta, Michael A.
    Cate, Jamie H. D.
    [J]. STRUCTURE, 2012, 20 (06) : 1051 - 1061
  • [24] Hydrolysis of konjac glucomannan by Trichoderma reesei mannanase and endoglucanases Cel7B and Cel5A for the production of glucomannooligosaccharides
    Mikkelson, Atte
    Maaheimo, Hannu
    Hakala, Terhi K.
    [J]. CARBOHYDRATE RESEARCH, 2013, 372 : 60 - 68
  • [25] Biochemical characterization and mode of action of a thermostable endoglucanase purified from Thermoascus aurantiacus
    Parry, NJ
    Beever, DE
    Owen, E
    Nerinckx, W
    Claeyssens, M
    Van Beeumen, J
    Bhat, MK
    [J]. ARCHIVES OF BIOCHEMISTRY AND BIOPHYSICS, 2002, 404 (02) : 243 - 253
  • [26] Versatile High Resolution Oligosaccharide Microarrays for Plant Glycobiology and Cell Wall Research
    Pedersen, Henriette L.
    Fangel, Jonatan U.
    McCleary, Barry
    Ruzanski, Christian
    Rydahl, Maja G.
    Ralet, Marie-Christine
    Farkas, Vladimir
    von Schantz, Laura
    Marcus, Susan E.
    Andersen, Mathias C. F.
    Field, Rob
    Ohlin, Mats
    Knox, J. Paul
    Clausen, Mads H.
    Willats, William G. T.
    [J]. JOURNAL OF BIOLOGICAL CHEMISTRY, 2012, 287 (47) : 39429 - 39438
  • [27] Cellobiose Dehydrogenase and a Copper-Dependent Polysaccharide Monooxygenase Potentiate Cellulose Degradation by Neurospora crassa
    Phillips, Christopher M.
    Beeson, William T.
    Cate, Jamie H.
    Marletta, Michael A.
    [J]. ACS CHEMICAL BIOLOGY, 2011, 6 (12) : 1399 - 1406
  • [28] Insights into the oxidative degradation of cellulose by a copper metalloenzyme that exploits biomass components
    Quinlan, R. Jason
    Sweeney, Matt D.
    Lo Leggio, Leila
    Otten, Harm
    Poulsen, Jens-Christian N.
    Johansen, Katja Salomon
    Krogh, Kristian B. R. M.
    Jorgensen, Christian Isak
    Tovborg, Morten
    Anthonsen, Annika
    Tryfona, Theodora
    Walter, Clive P.
    Dupree, Paul
    Xu, Feng
    Davies, Gideon J.
    Walton, Paul H.
    [J]. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 2011, 108 (37) : 15079 - 15084
  • [29] Phanerochaete chrysosporium produces a diverse array of extracellular enzymes when grown on sorghum
    Ray, Anamika
    Saykhedkar, Sayali
    Ayoubi-Canaan, Patricia
    Hartson, Steven D.
    Prade, Rolf
    Mort, Andrew J.
    [J]. APPLIED MICROBIOLOGY AND BIOTECHNOLOGY, 2012, 93 (05) : 2075 - 2089
  • [30] Hemicelluloses
    Scheller, Henrik Vibe
    Ulvskov, Peter
    [J]. ANNUAL REVIEW OF PLANT BIOLOGY, VOL 61, 2010, 61 : 263 - 289