Discovery of LPMO activity on hemicelluloses shows the importance of oxidative processes in plant cell wall degradation

被引:324
作者
Agger, Jane W. [1 ]
Isaksen, Trine [1 ]
Varnai, Aniko [1 ]
Vidal-Melgosa, Silvia [2 ]
Willats, William G. T. [2 ]
Ludwig, Roland [3 ]
Horn, Svein J. [1 ]
Eijsink, Vincent G. H. [1 ]
Westereng, Bjorge [1 ,2 ,4 ]
机构
[1] Norwegian Univ Life Sci NMBU, Dept Chem Biotechnol & Food Sci, N-1432 As, Norway
[2] Univ Copenhagen, Fac Sci, Dept Plant & Environm Sci, DK-1871 Frederiksberg, Denmark
[3] BOKU Univ Nat Resources & Life Sci, Dept Food Sci & Technol, A-1190 Vienna, Austria
[4] Univ Copenhagen, Fac Sci, Dept Geosci & Nat Resource Management, DK-1958 Frederiksberg C, Denmark
关键词
biorefinery; metallo enzymes; GH61; CBM33; LYTIC POLYSACCHARIDE MONOOXYGENASES; GLYCOSIDE HYDROLASE FAMILY; NEUROSPORA-CRASSA; CELLULOSE; XYLOGLUCAN; OLIGOSACCHARIDES; NOMENCLATURE; HYDROLYSIS; ENDOGLUCANASES; LIGNOCELLULOSE;
D O I
10.1073/pnas.1323629111
中图分类号
O [数理科学和化学]; P [天文学、地球科学]; Q [生物科学]; N [自然科学总论];
学科分类号
07 ; 0710 ; 09 ;
摘要
The recently discovered lytic polysaccharide monooxygenases (LPMOs) are known to carry out oxidative cleavage of glycoside bonds in chitin and cellulose, thus boosting the activity of well-known hydrolytic depolymerizing enzymes. Because biomass-degrading microorganisms tend to produce a plethora of LPMOs, and considering the complexity and copolymeric nature of the plant cell wall, it has been speculated that some LPMOs may act on other substrates, in particular the hemicelluloses that tether to cellulose microfibrils. We demonstrate that an LPMO from Neurospora crassa, NcLPMO9C, indeed degrades various hemicelluloses, in particular xyloglucan. This activity was discovered using a glycan microarray-based screening method for detection of substrate specificities of carbohydrate-active enzymes, and further explored using defined oligomeric hemicelluloses, isolated polymeric hemicelluloses and cell walls. Products generated by NcLPMO9C were analyzed using high performance anion exchange chromatography and multidimensional mass spectrometry. We show that NcLPMO9C generates oxidized products from a variety of substrates and that its product profile differs from those of hydrolytic enzymes acting on the same substrates. The enzyme particularly acts on the glucose backbone of xyloglucan, accepting various substitutions (xylose, galactose) in almost all positions. Because the attachment of xyloglucan to cellulose hampers depolymerization of the latter, it is possible that the beneficial effect of the LPMOs that are present in current commercial cellulase mixtures in part is due to hitherto undetected LPMO activities on recalcitrant hemicellulose structures.
引用
收藏
页码:6287 / 6292
页数:6
相关论文
共 42 条
[1]   NMR structure of a lytic polysaccharide monooxygenase provides insight into copper binding, protein dynamics, and substrate interactions [J].
Aachmann, Finn L. ;
Sorlie, Morten ;
Skjak-Braek, Gudmund ;
Eijsink, Vincent G. H. ;
Vaaje-Kolstad, Gustav .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 2012, 109 (46) :18779-18784
[2]   Isolation of cellotriosyl blocks from barley β-glucan with endo-1,4-β-glucanase from Trichoderma reesei [J].
Ajithkumar, Anu ;
Andersson, Roger ;
Siika-aho, Matti ;
Tenkanen, Maija ;
Aman, Per .
CARBOHYDRATE POLYMERS, 2006, 64 (02) :233-238
[3]   Oxidative Cleavage of Cellulose by Fungal Copper-Dependent Polysaccharide Monooxygenases [J].
Beeson, William T. ;
Phillips, Christopher M. ;
Cate, Jamie H. D. ;
Marletta, Michael A. .
JOURNAL OF THE AMERICAN CHEMICAL SOCIETY, 2012, 134 (02) :890-892
[4]   Cello-Oligosaccharide Oxidation Reveals Differences between Two Lytic Polysaccharide Monooxygenases (Family GH61) from Podospora anserina [J].
Bey, Mathieu ;
Zhou, Simeng ;
Poidevin, Laetitia ;
Henrissat, Bernard ;
Coutinho, Pedro M. ;
Berrin, Jean-Guy ;
Sigoillot, Jean-Claude .
APPLIED AND ENVIRONMENTAL MICROBIOLOGY, 2013, 79 (02) :488-496
[5]  
Burton RA, 2010, NAT CHEM BIOL, V6, P724, DOI [10.1038/NCHEMBIO.439, 10.1038/nchembio.439]
[6]   Production and effect of aldonic acids during enzymatic hydrolysis of lignocellulose at high dry matter content [J].
Cannella, David ;
Hsieh, Chia-wen C. ;
Felby, Claus ;
Jorgensen, Henning .
BIOTECHNOLOGY FOR BIOFUELS, 2012, 5
[7]   STRUCTURAL MODELS OF PRIMARY-CELL WALLS IN FLOWERING PLANTS - CONSISTENCY OF MOLECULAR-STRUCTURE WITH THE PHYSICAL-PROPERTIES OF THE WALLS DURING GROWTH [J].
CARPITA, NC ;
GIBEAUT, DM .
PLANT JOURNAL, 1993, 3 (01) :1-30
[8]   A SYSTEMATIC NOMENCLATURE FOR CARBOHYDRATE FRAGMENTATIONS IN FAB-MS MS SPECTRA OF GLYCOCONJUGATES [J].
DOMON, B ;
COSTELLO, CE .
GLYCOCONJUGATE JOURNAL, 1988, 5 (04) :397-409
[9]   The Paleozoic Origin of Enzymatic Lignin Decomposition Reconstructed from 31 Fungal Genomes [J].
Floudas, Dimitrios ;
Binder, Manfred ;
Riley, Robert ;
Barry, Kerrie ;
Blanchette, Robert A. ;
Henrissat, Bernard ;
Martinez, Angel T. ;
Otillar, Robert ;
Spatafora, Joseph W. ;
Yadav, Jagjit S. ;
Aerts, Andrea ;
Benoit, Isabelle ;
Boyd, Alex ;
Carlson, Alexis ;
Copeland, Alex ;
Coutinho, Pedro M. ;
de Vries, Ronald P. ;
Ferreira, Patricia ;
Findley, Keisha ;
Foster, Brian ;
Gaskell, Jill ;
Glotzer, Dylan ;
Gorecki, Pawel ;
Heitman, Joseph ;
Hesse, Cedar ;
Hori, Chiaki ;
Igarashi, Kiyohiko ;
Jurgens, Joel A. ;
Kallen, Nathan ;
Kersten, Phil ;
Kohler, Annegret ;
Kuees, Ursula ;
Kumar, T. K. Arun ;
Kuo, Alan ;
LaButti, Kurt ;
Larrondo, Luis F. ;
Lindquist, Erika ;
Ling, Albee ;
Lombard, Vincent ;
Lucas, Susan ;
Lundell, Taina ;
Martin, Rachael ;
McLaughlin, David J. ;
Morgenstern, Ingo ;
Morin, Emanuelle ;
Murat, Claude ;
Nagy, Laszlo G. ;
Nolan, Matt ;
Ohm, Robin A. ;
Patyshakuliyeva, Aleksandrina .
SCIENCE, 2012, 336 (6089) :1715-1719
[10]   Cleavage of cellulose by a CBM33 protein [J].
Forsberg, Zarah ;
Vaaje-Kolstad, Gustav ;
Westereng, Bjorge ;
Bunaes, Anne C. ;
Stenstrom, Yngve ;
MacKenzie, Alasdair ;
Sorlie, Morten ;
Horn, Svein J. ;
Eijsink, Vincent G. H. .
PROTEIN SCIENCE, 2011, 20 (09) :1479-1483