Chakrabartia godavariana gen. nov., sp. nov., a novel member of the family Sphingomonadaceae isolated from the Godavari River, India

被引:2
|
作者
Jani, Kunal [1 ,2 ]
Feng, Guang-Da [3 ]
Zhu, Hong-Hui [3 ]
Prakash, Om [1 ]
Bandal, Jayashree [4 ]
Rale, Vinay [2 ]
Shouche, Yogesh [1 ]
Sharma, Avinash [1 ]
机构
[1] Natl Ctr Cell Sci, Natl Ctr Microbial Resource, Pune 411021, Maharashtra, India
[2] Symbiosis Int, Symbiosis Sch Biol Sci, Pune 412115, Maharashtra, India
[3] Guangdong Inst Microbiol, State Key Lab Appl Microbiol Southern China, Guangdong Prov Key Lab Microbial Culture Collect, Guangdong Microbial Culture Collect Ctr GDMCC, Guangzhou 510070, Guangdong, Peoples R China
[4] KTHM Coll, Dept Microbiol, Nasik, Maharashtra, India
关键词
Godavari river; phospholipid; mass bathing; sym-homospermidine; FAME; 16S rRNA gene; EMENDED DESCRIPTION; COMB; NOV; NOVOSPHINGOBIUM; SPHINGOPYXIS; RECLASSIFICATION; SPHINGOBIUM; BACTERIUM; PROPOSAL; EMENDATION; SEQUENCES;
D O I
10.1099/ijsem.0.003512
中图分类号
Q93 [微生物学];
学科分类号
071005 ; 100705 ;
摘要
A Gram-stain-negative, aerobic, yellow-pigmented, oxidase-positive and rod-shaped bacterium, designated PRB40(T), was isolated from the Godavari River in India during the course of 'Kumbh Mela', the world's largest mass gathering event. Phylogenetic analysis based on 16S rRNA gene sequences revealed that strain PRB40(T) formed a lineage within the family Sphingomonadaceae and was distinct from the most closely related genera Sphingorhabdus, Novosphingobiumand Sphingomonas with sequence similarity values <= 95.2 %. Growth of strain PRB40(T) occurred at 10-40 degrees C (optimum 30 degrees C), at pH 6.0-9.0 (pH 7.0) and with 0-0.5 % (w/v) NaCl concentration (0 %). The major respiratory quinone was ubiquinone-10 (Q-10). It contained C-17:1 omega 6c, C-14:0 2-OH, summed feature 3 (C-16: (1)omega 7c and/or C-16: (1)omega 6c) and summed feature 8 (C-18:1 1 omega 7c and/or C-18 : (1)omega 6c) as the major cellular fatty acids. The predominant polar lipids were phospholipid, phosphatidylethanolamine and sphingoglycolipid. It took sym-homospermidine as the major polyamine. The DNA G+C content based on its draft genome sequence was 63.7 mol%. The polyphasic taxonomic analyses indicated that strain PRB40(T) represents a novel species of a novel genus within the family Sphingomonadaceae, for which the name Chakrabartia godavariana gen. nov., sp. nov. is proposed. The type strain of Chakrabartia godavariana is PRB40(T) (=MCC 3406(T) =GDMCC 1.1197(T) =KCTC 52678(T) =LMG 29985(T)).
引用
收藏
页码:2452 / 2458
页数:7
相关论文
共 50 条
  • [41] Chungangia koreensis gen. nov., sp nov., isolated from marine sediment
    Kim, Wonyong
    Traiwan, Jitsopin
    Park, Mi-Hak
    Jung, Min Young
    Oh, Su-Jin
    Yoon, Jung-Hoon
    Sukhoom, Ampaitip
    INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY, 2012, 62 : 1914 - 1920
  • [42] Ningiella ruwaisensis gen. nov., sp. nov., a member of the family Alteromonadaceae isolated from marine water of the Arabian Gulf
    Fotedar, Rashmi
    Caldwell, Matthew E.
    Sankaranarayanan, Krithivasan
    Al-Zeyara, Aisha
    Al-Malki, Ameena
    Kaul, Ridhima
    Al Marri, Masoud
    Al-Shamari, Hamad S.
    Lawson, Paul A.
    INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY, 2020, 70 (07) : 4130 - 4138
  • [43] Ferviditalea candida gen. nov., sp. nov., a novel member of the family Paenibacillaceae isolated from a geothermal area
    Chen, Ying
    Lv, Ai-Ping
    Li, Meng-Meng
    Ouyang, Yu-Ting
    Lian, Zheng-Han
    Chen, Le-Bin
    Liu, Ze-Tao
    Liu, Lan
    Jiao, Jian-Yu
    Li, Wen-Jun
    ANAEROBE, 2024, 88
  • [44] Homoserinimonas aerilata gen. nov., sp nov., a novel member of the family Microbacteriaceae isolated from an air sample in Korea
    Kim, Soo-Jin
    Jang, Yun-Hee
    Hamada, Moriyuki
    Tamura, Tomohiko
    Ahn, Jae-Hyung
    Weon, Hang-Yeon
    Suzuki, Ken-ichiro
    Kwon, Soon-Wo
    JOURNAL OF MICROBIOLOGY, 2012, 50 (04) : 673 - 679
  • [45] Chachezhania antarctica gen. nov., sp. nov., a novel member of the family 'Rhodobacteraceae' isolated from Antarctic seawater
    Yuan, Xiao-xue
    Wang, Ning
    Zhang, Meng-yao
    Chen, Xiu-lan
    Li, Chun-yang
    Zhang, Yu-zhong
    Shi, Mei
    Zhang, Xi-ying
    ANTONIE VAN LEEUWENHOEK INTERNATIONAL JOURNAL OF GENERAL AND MOLECULAR MICROBIOLOGY, 2019, 112 (12): : 1841 - 1848
  • [46] Pseudofrancisella aestuarii gen. nov., sp. nov., a novel member of the family Francisellaceae isolated from estuarine seawater
    Zheng, Min-Ling
    Jiao, Jian-Yu
    Dong, Lei
    Han, Ming-Xian
    Li, Liang-Hui
    Xiao, Min
    Chen, Cha
    Qu, Ping-Hua
    Li, Wen-Jun
    ANTONIE VAN LEEUWENHOEK INTERNATIONAL JOURNAL OF GENERAL AND MOLECULAR MICROBIOLOGY, 2019, 112 (06): : 877 - 886
  • [47] Mesohalobacter halotolerans gen. nov., sp. nov., isolated from a marine solar saltern
    Feng, Xi
    Zhang, Jin-Yu
    Sang, Jin
    Mu, Da-Shuai
    Du, Zong-Jun
    INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY, 2020, 70 (06) : 3588 - 3596
  • [48] Thalassorhabdus aurantiaca gen. nov., sp nov., a new member of the family Flavobacteriaceae isolated from seawater in South Korea
    Choi, Jiwon
    Jang, Jun Hyeong
    Cha, Seho
    Lee, Dongwook
    Seo, Taegun
    ANTONIE VAN LEEUWENHOEK INTERNATIONAL JOURNAL OF GENERAL AND MOLECULAR MICROBIOLOGY, 2018, 111 (11): : 2185 - 2193
  • [49] Testudinibacter aquarius gen. nov., sp nov., a member of the family Pasteurellaceae isolated from the oral cavity of freshwater turtles
    Hansen, Mie Johanne
    Pennanen, Elin Anna Erica
    Bojesen, Anders Miki
    Christensen, Henrik
    Bertelsen, Mads Frost
    INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY, 2016, 66 : 567 - 573
  • [50] Hyphobacterium vulgare gen. nov., sp nov., a novel alphaproteobacterium isolated from seawater
    Sun, Cong
    Wang, Rui-jun
    Su, Yue
    Fu, Ge-yi
    Zhao, Zhe
    Yu, Xiao-yun
    Zhang, Chong-ya
    Chen, Can
    Han, Shuai-bo
    Huang, Meng-meng
    Lv, Zheng-bing
    Wu, Min
    INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY, 2017, 67 (05) : 1169 - 1176