Chakrabartia godavariana gen. nov., sp. nov., a novel member of the family Sphingomonadaceae isolated from the Godavari River, India

被引:2
|
作者
Jani, Kunal [1 ,2 ]
Feng, Guang-Da [3 ]
Zhu, Hong-Hui [3 ]
Prakash, Om [1 ]
Bandal, Jayashree [4 ]
Rale, Vinay [2 ]
Shouche, Yogesh [1 ]
Sharma, Avinash [1 ]
机构
[1] Natl Ctr Cell Sci, Natl Ctr Microbial Resource, Pune 411021, Maharashtra, India
[2] Symbiosis Int, Symbiosis Sch Biol Sci, Pune 412115, Maharashtra, India
[3] Guangdong Inst Microbiol, State Key Lab Appl Microbiol Southern China, Guangdong Prov Key Lab Microbial Culture Collect, Guangdong Microbial Culture Collect Ctr GDMCC, Guangzhou 510070, Guangdong, Peoples R China
[4] KTHM Coll, Dept Microbiol, Nasik, Maharashtra, India
关键词
Godavari river; phospholipid; mass bathing; sym-homospermidine; FAME; 16S rRNA gene; EMENDED DESCRIPTION; COMB; NOV; NOVOSPHINGOBIUM; SPHINGOPYXIS; RECLASSIFICATION; SPHINGOBIUM; BACTERIUM; PROPOSAL; EMENDATION; SEQUENCES;
D O I
10.1099/ijsem.0.003512
中图分类号
Q93 [微生物学];
学科分类号
071005 ; 100705 ;
摘要
A Gram-stain-negative, aerobic, yellow-pigmented, oxidase-positive and rod-shaped bacterium, designated PRB40(T), was isolated from the Godavari River in India during the course of 'Kumbh Mela', the world's largest mass gathering event. Phylogenetic analysis based on 16S rRNA gene sequences revealed that strain PRB40(T) formed a lineage within the family Sphingomonadaceae and was distinct from the most closely related genera Sphingorhabdus, Novosphingobiumand Sphingomonas with sequence similarity values <= 95.2 %. Growth of strain PRB40(T) occurred at 10-40 degrees C (optimum 30 degrees C), at pH 6.0-9.0 (pH 7.0) and with 0-0.5 % (w/v) NaCl concentration (0 %). The major respiratory quinone was ubiquinone-10 (Q-10). It contained C-17:1 omega 6c, C-14:0 2-OH, summed feature 3 (C-16: (1)omega 7c and/or C-16: (1)omega 6c) and summed feature 8 (C-18:1 1 omega 7c and/or C-18 : (1)omega 6c) as the major cellular fatty acids. The predominant polar lipids were phospholipid, phosphatidylethanolamine and sphingoglycolipid. It took sym-homospermidine as the major polyamine. The DNA G+C content based on its draft genome sequence was 63.7 mol%. The polyphasic taxonomic analyses indicated that strain PRB40(T) represents a novel species of a novel genus within the family Sphingomonadaceae, for which the name Chakrabartia godavariana gen. nov., sp. nov. is proposed. The type strain of Chakrabartia godavariana is PRB40(T) (=MCC 3406(T) =GDMCC 1.1197(T) =KCTC 52678(T) =LMG 29985(T)).
引用
收藏
页码:2452 / 2458
页数:7
相关论文
共 50 条
  • [21] Planktosalinus lacus gen. nov., sp nov., a member of the family Flavobacteriaceae isolated from a salt lake
    Zhong, Zhi-Ping
    Liu, Ying
    Wang, Fang
    Zhou, Yu-Guang
    Liu, Hong-Can
    Liu, Qing
    Liu, Zhi-Pei
    INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY, 2016, 66 : 2084 - 2089
  • [22] Chryseoglobus frigidaquae gen. nov., sp nov., a novel member of the family Microbacteriaceae
    Baik, Keun Sik
    Park, Seong Chan
    Kim, Ho Jun
    Lee, Kang Hyun
    Seong, Chi Nam
    INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY, 2010, 60 : 1311 - 1316
  • [23] Urechidicola croceus gen. nov., sp. nov., a member of the family Flavobacteriaceae
    Shin, Su-Kyoung
    Yi, Hana
    INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY, 2020, 70 (03) : 1751 - 1757
  • [24] Taeania maliponensis gen. nov., sp nov., a member of the family Flavobacteriaceae isolated from seawater
    Jung, Yong-Taek
    Yoon, Sun Young
    Lee, Jung-Sook
    Yoon, Jung-Hoon
    INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY, 2016, 66 : 3552 - 3557
  • [25] Planctobacterium marinum gen. nov., sp nov., a new member of the family Alteromonadaceae isolated from seawater
    Sheu, Der-Shyan
    Sheu, Shih-Yi
    Lin, Kai-Rou
    Chen, Yuh-Ling Lee
    Chen, Wen-Ming
    INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY, 2017, 67 (04) : 974 - 980
  • [26] Alexandriicola marinus gen. nov., sp. nov., a new member of the family Rhodobacteraceae isolated from marine phycosphere
    Zhu, Wen-Zhuo
    Gao, Hui-Min
    Ge, Ya-Ming
    Dai, Jun
    Yang, Xi
    Zhang, Xiao-Ling
    Yang, Qiao
    ANTONIE VAN LEEUWENHOEK INTERNATIONAL JOURNAL OF GENERAL AND MOLECULAR MICROBIOLOGY, 2022, 115 (04): : 473 - 486
  • [27] Specibacter cremeus gen. nov., sp. nov., a new member of the family Micrococcaceae isolated from a natural cave
    Lee, Soon Dong
    Schumann, Peter
    INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY, 2019, 69 (06) : 1767 - 1774
  • [28] Desertiactinospora gelatinilytica gen. nov., sp. nov., a new member of the family Streptosporangiaceae isolated from the Karakum Desert
    Saygin, Hayrettin
    Ay, Hilal
    Guven, Kiymet
    Cetin, Demet
    Sahin, Nevzat
    ANTONIE VAN LEEUWENHOEK INTERNATIONAL JOURNAL OF GENERAL AND MOLECULAR MICROBIOLOGY, 2019, 112 (03): : 409 - 423
  • [29] Coprobacter fastidiosus gen. nov., sp nov., a novel member of the family Porphyromonadaceae isolated from infant faeces
    Shkoporov, Andrei N.
    Khokhlova, Ekaterina V.
    Chaplin, Andrei V.
    Kafarskaia, Lyudmila I.
    Nikolin, Alexei A.
    Polyakov, Vladimir Yu.
    Shcherbakova, Victoria A.
    Chernaia, Zoya A.
    Efimov, Boris A.
    INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY, 2013, 63 : 4181 - 4188
  • [30] Amniculibacterium aquaticum gen. nov., sp. nov., a new member of the family Flavobacteriaceae isolated from a stream
    Chen, Wen-Ming
    Guo, Ya-Ping
    Sheu, Ceshing
    Sheu, Shih-Yi
    ARCHIVES OF MICROBIOLOGY, 2019, 201 (08) : 1119 - 1127