MATHEMATICAL ANALYSIS AND DYNAMIC ACTIVE SUBSPACES FOR A LONG TERM MODEL OF HIV

被引:17
作者
Loudon, Tyson [1 ]
Pankavichi, Stephen [2 ]
机构
[1] Univ Minnesota Twin Cities, Sch Math, 12 Vincent Hall 206 Church St SE, Minneapolis, MN 55455 USA
[2] Colorado Sch Mines, Dept Appl Math & Stat, 1500 Illinois St, Golden, CO 80401 USA
基金
美国国家科学基金会;
关键词
HIV modeling; stability analysis; active subspaces; dimension reduction; sensitivity analysis; INFECTION; TYPE-1; LOADS;
D O I
10.3934/mbe.2017040
中图分类号
Q [生物科学];
学科分类号
07 ; 0710 ; 09 ;
摘要
Recently, a long-term model of HIV infection dynamics [8] was developed to describe the entire time course of the disease. It consists of a large system of ODEs with many parameters, and is expensive to simulate. In the current paper, this model is analyzed by determining all infection-free steady states and studying the local stability properties of the unique biologically relevant equilibrium. Active subspace methods are then used to perform a global sensitivity analysis and study the dependence of an infected individual's T-cell count on the parameter space. Building on these results, a global-in-time approximation of the T-cell count is created by constructing dynamic active subspaces and reduced order models are generated, thereby allowing for inexpensive computation.
引用
收藏
页码:709 / 733
页数:25
相关论文
共 27 条
[11]  
Jones Eric., 2014, SIAM Undergraduate Research Online, V7, P89, DOI DOI 10.1137/13S012698
[12]  
Kirschner D, 2000, J ACQ IMMUN DEF SYND, V24, P352
[13]  
Kirschner D., 1996, AMS NOTICES, V43, P191
[14]  
Kirschner D. E., 1993, MATH POPULATION DYNA, VOne, P295
[15]  
Kirschner Denise E., 1998, Journal of Biological Systems, V6, P71, DOI 10.1142/S0218339098000091
[16]   A model of primary HIV-1 infection [J].
Murray, JM ;
Kaufmann, G ;
Kelleher, AD ;
Cooper, DA .
MATHEMATICAL BIOSCIENCES, 1998, 154 (02) :57-85
[17]  
Nowak M.A., 2000, Virus Dynamics: Mathematical Principles of Immunology and Virology
[18]  
Pankavich S., 2015, AIMS P, P913
[19]  
Pankavich S., 2015, BISTABLE DYNAM UNPUB
[20]   The Effects of Latent Infection on the Dynamics of HIV [J].
Pankavich S. .
Differential Equations and Dynamical Systems, 2016, 24 (3) :281-303