Genome wide identification and comparative analysis of glutathione transferases (GST) family genes in Brassica napus

被引:55
作者
Wei, Lijuan [1 ,2 ]
Zhu, Yan [1 ,2 ]
Liu, Ruiying [1 ,2 ]
Zhang, Aoxiang [1 ,2 ]
Zhu, Meicheng [1 ,2 ]
Xu, Wen [1 ,2 ]
Lin, Ai [1 ,2 ]
Lu, Kun [1 ,2 ]
Li, Jiana [1 ,2 ]
机构
[1] Southwest Univ, Coll Agron & Biotechnol, Chongqing Engn Res Ctr Rapeseed, Chongqing 400716, Peoples R China
[2] Southwest Univ, Acad Agr Sci, Chongqing 400716, Peoples R China
基金
中国博士后科学基金; 中国国家自然科学基金;
关键词
S-TRANSFERASE; EXPRESSION ANALYSIS; FUNCTIONAL DIVERGENCE; SUPERGENE FAMILY; STRESS TOLERANCE; ARABIDOPSIS; EVOLUTION; COMPLEX; MECHANISMS; BINDING;
D O I
10.1038/s41598-019-45744-5
中图分类号
O [数理科学和化学]; P [天文学、地球科学]; Q [生物科学]; N [自然科学总论];
学科分类号
07 ; 0710 ; 09 ;
摘要
Glutathione transferases (GSTs) are multifunctional enzymes that play important roles in plant development and responses to biotic and abiotic stress. However, a systematic analysis of GST family members in Brassica napus has not yet been reported. In this study, we identified 179 full-length GST genes in B. napus, 44.2% of which are clustered on various chromosomes. In addition, we identified 141 duplicated GST gene pairs in B. napus. Molecular evolutionary analysis showed that speciation and whole-genome triplication played important roles in the divergence of the B. napus GST duplicated genes. Transcriptome analysis of 21 tissues at different developmental stages showed that 47.6% of duplicated GST gene pairs have divergent expression patterns, perhaps due to structural divergence. We constructed a GST gene coexpression network with genes encoding various transcription factors (NAC, MYB, WRKY and bZIP) and identified six modules, including genes expressed during late seed development (after 40 days; BnGSTU19, BnGSTU20 and BnGSTZ1) and in the seed coat (BnGSTF6 and BnGSTF12), stamen and anther (BnGSTF8), root and stem (BnGSTU21), leaves and funiculus, as well as during the late stage of pericarp development (after 40 days; BnGSTU12 and BnGSTF2) and in the radicle during seed germination (BnGSTF14, BnGSTU1, BnGSTU28, and BnGSTZ1). These findings lay the foundation for elucidating the roles of GSTs in B. napus.
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页数:13
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