On the role of residue phosphorylation in 14-3-3 partners: AANAT as a case study

被引:7
作者
Masone, Diego [1 ,2 ]
Uhart, Marina [1 ]
Bustos, Diego M. [1 ,3 ]
机构
[1] Univ Nacl Cuyo, CONICET, Inst Histol & Embriol IHEM, CC56, RA-5500 Mendoza, Argentina
[2] Univ Nacl Cuyo, Fac Ingn, Mendoza, Argentina
[3] Univ Nacl Cuyo, Fac Ciencias Exactas & Nat, Mendoza, Argentina
关键词
MOLECULAR-DYNAMICS; CRYSTAL-STRUCTURE; PROTEIN; SIMULATIONS; BINDING; CHARMM; GROMACS; GUI; DATABASE; BUILDER;
D O I
10.1038/srep46114
中图分类号
O [数理科学和化学]; P [天文学、地球科学]; Q [生物科学]; N [自然科学总论];
学科分类号
07 ; 0710 ; 09 ;
摘要
Twenty years ago, a novel concept in protein structural biology was discovered: the intrinsically disordered regions (IDRs). These regions remain largely unstructured under native conditions and the more are studied, more properties are attributed to them. Possibly, one of the most important is their ability to conform a new type of protein-protein interaction. Besides the classical domain-todomain interactions, IDRs follow a 'fly-casting' model including 'induced folding'. Unfortunately, it is only possible to experimentally explore initial and final states. However, the complete movie of conformational changes of protein regions and their characterization can be addressed by in silico experiments. Here, we simulate the binding of two proteins to describe how the phosphorylation of a single residue modulates the entire process. 14-3-3 protein family is considered a master regulator of phosphorylated proteins and from a modern point-of-view, protein phosphorylation is a three component system, with writers (kinases), erasers (phosphatases) and readers. This later biological role is attributed to the 14-3-3 protein family. Our molecular dynamics results show that phosphorylation of the key residue Thr31 in a partner of 14-3-3, the aralkylamine N-acetyltransferase, releases the flycasting mechanism during binding. On the other hand, the non-phosphorylation of the same residue traps the proteins, systematically and repeatedly driving the simulations into wrong protein-protein conformations.
引用
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页数:9
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