Single-stranded antisense siRNAs guide target RNA cleavage in RNAi

被引:1134
作者
Martinez, J [1 ]
Patkaniowska, A [1 ]
Urlaub, H [1 ]
Lührmann, R [1 ]
Tuschl, T [1 ]
机构
[1] Max Planck Inst Biophys Chem, Dept Cellular Biochem, D-37077 Gottingen, Germany
关键词
D O I
10.1016/S0092-8674(02)00908-X
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
Small interfering RNAs (siRNAs) are the mediators of mRNA degradation in the process of RNA interference (RNAi). Here, we describe a human biochemical system that recapitulates siRNA-mediated target RNA degradation. By using affinity-tagged siRNAs, we demonstrate that a single-stranded siRNA resides in the RNA-induced silencing complex (RISC) together with eIF2C1 and/or eIF2C2 (human GERp95) Argonaute proteins. RISC is rapidly formed in HeLa cell cytoplasmic extract supplemented with 21 nt siRNA duplexes, but also by adding single-stranded antisense RNAs, which range in size between 19 and 29 nucleotides. Single-stranded antisense siRNAs are also effectively silencing genes in HeLa cells, especially when 5'-phosphorylated, and expand the repertoire of RNA reagents suitable for gene targeting.
引用
收藏
页码:563 / 574
页数:12
相关论文
共 56 条
[1]   RNA-dependent RNA polymerases, viruses, and RNA silencing [J].
Ahlquist, P .
SCIENCE, 2002, 296 (5571) :1270-1273
[2]   Role for a bidentate ribonuclease in the initiation step of RNA interference [J].
Bernstein, E ;
Caudy, AA ;
Hammond, SM ;
Hannon, GJ .
NATURE, 2001, 409 (6818) :363-366
[3]   Specific interference with gene expression induced by long, double-stranded RNA in mouse embryonal teratocarcinoma cell lines [J].
Billy, E ;
Brondani, V ;
Zhang, HD ;
Müller, U ;
Filipowicz, W .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 2001, 98 (25) :14428-14433
[4]   Phenotypic silencing of cytoplasmic genes using sequence-specific double-stranded short interfering RNA and its application in the reverse genetics of wild type negative-strand RNA viruses [J].
Bitko V. ;
Barik S. .
BMC Microbiology, 1 (1) :1-11
[5]   Specific inhibition of gene expression by small double-stranded RNAs in invertebrate and vertebrate systems [J].
Caplen, NJ ;
Parrish, S ;
Imani, F ;
Fire, A ;
Morgan, RA .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 2001, 98 (17) :9742-9747
[6]   Domains in gene silencing and cell differentiation proteins: the novel PAZ domain and redefinition of the Piwi domain [J].
Cerutti, L ;
Mian, N ;
Bateman, A .
TRENDS IN BIOCHEMICAL SCIENCES, 2000, 25 (10) :481-482
[7]   GERp95, a membrane-associated protein that belongs to a family of proteins involved in stem cell differentiation [J].
Cikaluk, DE ;
Tahbaz, N ;
Hendricks, LC ;
DiMattia, GE ;
Hansen, D ;
Pilgrim, D ;
Hobman, TC .
MOLECULAR BIOLOGY OF THE CELL, 1999, 10 (10) :3357-3372
[8]   miwi, a murine homolog of piwi, encodes a cytoplasmic protein essential for spermatogenesis [J].
Deng, W ;
Lin, HF .
DEVELOPMENTAL CELL, 2002, 2 (06) :819-830
[9]   ACCURATE TRANSCRIPTION INITIATION BY RNA POLYMERASE-II IN A SOLUBLE EXTRACT FROM ISOLATED MAMMALIAN NUCLEI [J].
DIGNAM, JD ;
LEBOVITZ, RM ;
ROEDER, RG .
NUCLEIC ACIDS RESEARCH, 1983, 11 (05) :1475-1489
[10]  
Eckstein F., 1991, OLIGONUCLEOTIDES ANA