Modeling the binding of cholera toxin to a lipid membrane by a non-additive two-dimensional hard-disk model

被引:10
|
作者
Faller, R [1 ]
Kuhl, TL [1 ]
机构
[1] Univ Calif Davis, Dept Chem Engn & Mat Sci, Davis, CA 95616 USA
关键词
lipid bilayers; Monte Carlo simulation; protein binding; hard disk;
D O I
10.1081/SMTS-120026965
中图分类号
T [工业技术];
学科分类号
08 ;
摘要
A coupled two-layer hard-disk model in two dimensions inspired by the interactions of mixtures of different lipids in the outer bilayer leaflet was derived. It is effectively a non-additive mixture of hard disks. A gas and a crystal phase are observed. The recognition and binding of pathogenic cholera toxin are modeled by fixing lipid-binding sites in space in pentagonal geometries constrained by the protein. At constant pressure, this positional constraint leads to an increase in the area per molecule as the lipid-packing structure is distorted. This distortion increases with increasing density or pressure. Variations of the basic model are discussed. We find that the overall area per molecule scales with the area per molecule of the majority component.
引用
收藏
页码:343 / 352
页数:10
相关论文
共 23 条
  • [1] Orientational order of the two-dimensional hard-disk system
    Jaster, A
    EUROPHYSICS LETTERS, 1998, 42 (03): : 277 - 281
  • [2] Short-time behaviour of the two-dimensional hard-disk
    Jaster, A
    PHYSICA A, 2000, 277 (1-2): : 106 - 114
  • [3] Lateral depletion effect on two-dimensional ordering of bacteriorhodopsins in a lipid bilayer: A theoretical study based on a binary hard-disk model
    Suda, Keiju
    Suematsu, Ayumi
    Akiyama, Ryo
    JOURNAL OF CHEMICAL PHYSICS, 2021, 154 (20):
  • [4] Brownian-molecular dynamic correspondence in two-dimensional hard-disk fluids
    Torres-Carbajal, Alexis
    Sevilla, Francisco J.
    Nicasio-Collazo, Luz Adriana
    Medina-Noyola, Magdaleno
    Castaneda-Priego, Ramon
    MOLECULAR PHYSICS, 2024, 122 (19-20)
  • [5] Phase diagrams and crystal-fluid surface tensions in additive and nonadditive two-dimensional binary hard-disk mixtures
    Lin, Shang-Chun
    Oettel, Martin
    PHYSICAL REVIEW E, 2018, 98 (01)
  • [6] Structure of two-dimensional hard-disk mixtures: Modified fundamental-measure theory
    Kim, Soon-Chul
    Suh, Soong-Hyuck
    Seong, Baek-Seok
    FLUID PHASE EQUILIBRIA, 2008, 268 (1-2) : 114 - 120
  • [7] Experimental Test of the Scaled-Particle Theory for a Two-Dimensional Hard-Disk Fluid
    Smith, Tennyson
    JOURNAL OF CHEMICAL PHYSICS, 1965, 43 (07): : 2560 - 2562
  • [8] Collisional statistics and dynamics of two-dimensional hard-disk systems: From fluid to solid
    Taloni, Alessandro
    Meroz, Yasmine
    Huerta, Adrian
    PHYSICAL REVIEW E, 2015, 92 (02)
  • [9] BOND-ANGULAR ORDER IN TWO-DIMENSIONAL LENNARD-JONES AND HARD-DISK SYSTEMS
    STRANDBURG, KJ
    ZOLLWEG, JA
    CHESTER, GV
    PHYSICAL REVIEW B, 1984, 30 (05): : 2755 - 2759
  • [10] A BASIC SET OF CANCELLATION VIOLATING SEQUENCES FOR FINITE TWO-DIMENSIONAL NON-ADDITIVE MEASUREMENT
    Ng, Che Tat
    ANNALES MATHEMATICAE SILESIANAE, 2024, 38 (01) : 64 - 77