[1] Univ Cambridge, Dept Med, Cambridge CB2 0QQ, England
[2] Wellcome Trust Sanger Inst, Cambridge CB10 1SA, England
[3] King Mongkuts Univ Technol Thonburi, Sch Bioresources & Technol, Bioinformat & Syst Biol Program, Bangkok 10140, Thailand
[4] Univ St Andrews, Sch Med, St Andrews KY16 9AJ, Fife, Scotland
[5] Univ Helsinki, Dept Math & Sci, Helsinki 00100, Finland
[6] Univ Helsinki, Dept Med & Clin Genet, Genome Scale Biol Res Program, Helsinki 00100, Finland
[7] Univ Cambridge, Dept Vet Med, Cambridge CB3 0ES, England
[8] Univ Florida, Emerging Pathogens Inst, Gainesville, FL 32611 USA
[9] Inst Trop Med, B-2000 Antwerp, Belgium
[10] Univ Ghent, Fac Sci, Lab Microbiol, B-9000 Ghent, Belgium
[11] Inst Pasteur, Dept Infect & Epidemiol, Enter Bacteria Pathogen Unit, F-75015 Paris, France
[12] Inst Pasteur, Dept Microbiol, Collect Inst Pasteur, F-75015 Paris, France
[13] Royal Darwin Hosp, Darwin, NT 0811, Australia
[14] Charles Darwin Univ, Menzies Sch Hlth Res, Global & Trop Hlth Div, Darwin, NT 0811, Australia
[15] Mahidol Univ, Fac Trop Med, Mahidol Oxford Trop Med Res, Bangkok 10400, Thailand
[16] Mahidol Univ, Fac Trop Med, Dept Trop Hyg, Bangkok 10400, Thailand
[17] Univ Oxford, Ctr Trop Med & Global Hlth, Oxford OX3 7FZ, England
[18] Mahosot Hosp, Microbiol Lab, Lao Oxford Mahosot Hosp Wellcome Trust Res Unit, Viangchan, Laos
[19] Imperial Coll, Dept Infect Dis Epidemiol, London SW7 2AZ, England
[20] Univ Oslo, Dept Biostat, N-0313 Oslo, Norway
[21] Northren Arizona Univ, Ctr Microbial Genet & Genom, Flagstaff, AZ 86011 USA
[22] London Sch Hyg & Trop Med, London WC1E 7HT, England