Global and regional dissemination and evolution of Burkholderia pseudomallei

被引:125
作者
Chewapreecha, Claire [1 ,2 ,3 ]
Holden, Matthew T. G. [2 ,4 ]
Vehkala, Minna [5 ]
Valimaki, Niko [6 ]
Yang, Zhirong [5 ]
Harris, Simon R. [2 ]
Mather, Alison E. [7 ]
Tuanyok, Apichai [8 ]
De Smet, Birgit [9 ,10 ]
Le Hello, Simon [11 ]
Bizet, Chantal [12 ]
Mayo, Mark [13 ,14 ]
Wuthiekanun, Vanaporn [15 ]
Limmathurotsakul, Direk [15 ,16 ,17 ]
Phetsouvanh, Rattanaphone [18 ]
Spratt, Brian G. [19 ]
Corander, Jukka [5 ,20 ]
Keim, Paul [21 ]
Dougan, Gordon [2 ]
Dance, David A. B. [17 ,18 ,22 ]
Currie, Bart J.
Parkhill, Julian [2 ]
Peacock, Sharon J. [1 ,2 ,22 ]
机构
[1] Univ Cambridge, Dept Med, Cambridge CB2 0QQ, England
[2] Wellcome Trust Sanger Inst, Cambridge CB10 1SA, England
[3] King Mongkuts Univ Technol Thonburi, Sch Bioresources & Technol, Bioinformat & Syst Biol Program, Bangkok 10140, Thailand
[4] Univ St Andrews, Sch Med, St Andrews KY16 9AJ, Fife, Scotland
[5] Univ Helsinki, Dept Math & Sci, Helsinki 00100, Finland
[6] Univ Helsinki, Dept Med & Clin Genet, Genome Scale Biol Res Program, Helsinki 00100, Finland
[7] Univ Cambridge, Dept Vet Med, Cambridge CB3 0ES, England
[8] Univ Florida, Emerging Pathogens Inst, Gainesville, FL 32611 USA
[9] Inst Trop Med, B-2000 Antwerp, Belgium
[10] Univ Ghent, Fac Sci, Lab Microbiol, B-9000 Ghent, Belgium
[11] Inst Pasteur, Dept Infect & Epidemiol, Enter Bacteria Pathogen Unit, F-75015 Paris, France
[12] Inst Pasteur, Dept Microbiol, Collect Inst Pasteur, F-75015 Paris, France
[13] Royal Darwin Hosp, Darwin, NT 0811, Australia
[14] Charles Darwin Univ, Menzies Sch Hlth Res, Global & Trop Hlth Div, Darwin, NT 0811, Australia
[15] Mahidol Univ, Fac Trop Med, Mahidol Oxford Trop Med Res, Bangkok 10400, Thailand
[16] Mahidol Univ, Fac Trop Med, Dept Trop Hyg, Bangkok 10400, Thailand
[17] Univ Oxford, Ctr Trop Med & Global Hlth, Oxford OX3 7FZ, England
[18] Mahosot Hosp, Microbiol Lab, Lao Oxford Mahosot Hosp Wellcome Trust Res Unit, Viangchan, Laos
[19] Imperial Coll, Dept Infect Dis Epidemiol, London SW7 2AZ, England
[20] Univ Oslo, Dept Biostat, N-0313 Oslo, Norway
[21] Northren Arizona Univ, Ctr Microbial Genet & Genom, Flagstaff, AZ 86011 USA
[22] London Sch Hyg & Trop Med, London WC1E 7HT, England
来源
NATURE MICROBIOLOGY | 2017年 / 2卷 / 04期
基金
英国惠康基金; 英国生物技术与生命科学研究理事会; 英国医学研究理事会;
关键词
MELIOIDOSIS; VIRULENCE; MRSA; TOOL;
D O I
10.1038/nmicrobiol.2016.263
中图分类号
Q93 [微生物学];
学科分类号
071005 ; 100705 ;
摘要
The environmental bacterium Burkholderia pseudomallei causes an estimated 165,000 cases of human melioidosis per year worldwide and is also classified as a biothreat agent. We used whole genome sequences of 469 B. pseudomallei isolates from 30 countries collected over 79 years to explore its geographic transmission. Our data point to Australia as an early reservoir, with transmission to Southeast Asia followed by onward transmission to South Asia and East Asia. Repeated reintroductions were observed within the Malay Peninsula and between countries bordered by the Mekong River. Our data support an African origin of the Central and South American isolates with introduction of B. pseudomallei into the Americas between 1650 and 1850, providing a temporal link with the slave trade. We also identified geographically distinct genes/variants in Australasian or Southeast Asian isolates alone, with virulence-associated genes being among those over-represented. This provides a potential explanation for clinical manifestations of melioidosis that are geographically restricted.
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页数:8
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