Spontaneous driving forces give rise to protein-RNA condensates with coexisting phases and complex material properties

被引:307
作者
Boeynaems, Steven [1 ]
Holehouse, Alex S. [2 ,3 ]
Weinhardt, Venera [4 ,5 ]
Kovacs, Denes [6 ]
Van Lindt, Joris [6 ]
Larabell, Carolyn [4 ,5 ]
Van Den Bosch, Ludo [7 ,8 ]
Das, Rhiju [9 ,10 ]
Tompa, Peter S. [6 ,11 ]
Pappu, Rohit, V [2 ,3 ]
Gitler, Aaron D. [1 ]
机构
[1] Stanford Univ, Dept Genet, Sch Med, Stanford, CA 94305 USA
[2] Washington Univ, Dept Biomed Engn, St Louis, MO 63130 USA
[3] Washington Univ, Ctr Sci & Engn Living Syst, St Louis, MO 63130 USA
[4] Lawrence Berkeley Natl Lab, Mol Biophys & Integrated Bioimaging Div, Berkeley, CA 94720 USA
[5] Univ Calif San Francisco, Dept Anat, San Francisco, CA 94143 USA
[6] Vrije Univ Brussel, Ctr Struct Biol, Vlaams Inst Biotechnol, B-1050 Brussels, Belgium
[7] Vlaams Inst Biotechnol, Lab Neurobiol, Ctr Brain & Dis Res, B-3000 Leuven, Belgium
[8] Katholieke Univ Leuven, Dept Neurosci, Expt Neurol, B-3001 Leuven, Belgium
[9] Stanford Univ, Dept Biochem, Stanford, CA 94305 USA
[10] Stanford Univ, Dept Phys, Stanford, CA 94305 USA
[11] Hungarian Acad Sci, Res Ctr Nat Sci, Inst Enzymol, H-1117 Budapest, Hungary
基金
美国国家卫生研究院; 美国国家科学基金会;
关键词
phase transitions; biomolecular condensates; complex coacervation; RNA; intrinsically disordered proteins; STRESS GRANULES; OLIGONUCLEOTIDE THERAPIES; DISORDERED PROTEINS; SEPARATION; REVEALS; TRANSITION; REPEAT; DOMAIN; ALS; COACERVATION;
D O I
10.1073/pnas.1821038116
中图分类号
O [数理科学和化学]; P [天文学、地球科学]; Q [生物科学]; N [自然科学总论];
学科分类号
07 ; 0710 ; 09 ;
摘要
Phase separation of multivalent protein and RNA molecules underlies the biogenesis of biomolecular condensates such as membraneless organelles. In vivo, these condensates encompass hundreds of distinct types of molecules that typically organize into multilayered structures supporting the differential partitioning of molecules into distinct regions with distinct material properties. The interplay between driven (active) versus spontaneous (passive) processes that are required for enabling the formation of condensates with coexisting layers of distinct material properties remains unclear. Here, we deploy systematic experiments and simulations based on coarse-grained models to show that the collective interactions among the simplest, biologically relevant proteins and archetypal RNA molecules are sufficient for driving the spontaneous emergence of multilayered condensates with distinct material properties. These studies yield a set of rules regarding homotypic and heterotypic interactions that are likely to be relevant for understanding the interplay between active and passive processes that control the formation of functional biomolecular condensates.
引用
收藏
页码:7889 / 7898
页数:10
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