Structural and Functional Analysis of Bacillus subtilis YisP Reveals a Role of Its Product in Biofilm Production

被引:39
作者
Feng, Xinxin [1 ]
Hu, Yumei [2 ]
Zheng, Yingying [2 ]
Zhu, Wei [1 ]
Li, Kai [1 ]
Huang, Chun-Hsiang [2 ]
Ko, Tzu-Ping [3 ]
Ren, Feifei [2 ]
Chan, Hsiu-Chien [2 ]
Nega, Mulugeta [4 ]
Bogue, Shannon [1 ]
Lopez, Daniel [5 ]
Kolter, Roberto [5 ]
Goetz, Friedrich [4 ]
Guo, Rey-Ting [2 ]
Oldfield, Eric [1 ]
机构
[1] Univ Illinois, Dept Chem, Urbana, IL 61801 USA
[2] Tianjin Inst Ind Biotechnol, Ind Enzymes Natl Engn Lab, Tianjin 300308, Peoples R China
[3] Acad Sinica, Inst Biol Chem, Taipei 11529, Taiwan
[4] Univ Tubingen, Interfac Inst Microbiol & Infect Med Tubingen, D-72076 Tubingen, Germany
[5] Harvard Univ, Sch Med, Dept Microbiol & Immunol, Boston, MA 02115 USA
来源
CHEMISTRY & BIOLOGY | 2014年 / 21卷 / 11期
基金
国家高技术研究发展计划(863计划);
关键词
STAPHYLOCOCCUS-AUREUS; BIOSYNTHESIS; FARNESOL; STAPHYLOXANTHIN; CRYSTALLOGRAPHY; BEHAVIOR; SYSTEM;
D O I
10.1016/j.chembiol.2014.08.018
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
YisP is involved in biofilm formation in Bacillus subtilis and has been predicted to produce C30 isoprenoids. We determined the structure of YisP and observed that it adopts the same fold as squalene and dehydrosqualene synthases. However, the first aspartate-rich motif found in essentially all isoprenoid synthases is aspartate poor in YisP and cannot catalyze head-to-head condensation reactions. We find that YisP acts as a phosphatase, catalyzing formation of farnesol from farnesyl diphosphate, and that it is the first phosphatase to adopt the fold seen in the head-to-head prenyl synthases. Farnesol restores biofilm formation in a Delta yisp mutant and modifies lipid membrane structure similarly to the virulence factor staphyloxanthin. This work clarifies the role of YisP in biofilm formation and suggests an intriguing possibility that many of the YisP-like homologs found in other bacteria may also have interesting products and functions.
引用
收藏
页码:1557 / 1563
页数:7
相关论文
共 37 条
[1]   PHENIX: a comprehensive Python']Python-based system for macromolecular structure solution [J].
Adams, Paul D. ;
Afonine, Pavel V. ;
Bunkoczi, Gabor ;
Chen, Vincent B. ;
Davis, Ian W. ;
Echols, Nathaniel ;
Headd, Jeffrey J. ;
Hung, Li-Wei ;
Kapral, Gary J. ;
Grosse-Kunstleve, Ralf W. ;
McCoy, Airlie J. ;
Moriarty, Nigel W. ;
Oeffner, Robert ;
Read, Randy J. ;
Richardson, David C. ;
Richardson, Jane S. ;
Terwilliger, Thomas C. ;
Zwart, Peter H. .
ACTA CRYSTALLOGRAPHICA SECTION D-STRUCTURAL BIOLOGY, 2010, 66 :213-221
[2]   EFFECTS OF FARNESOL ON THE THERMOTROPIC BEHAVIOR OF DIMYRISTOYLPHOSPHATIDYLCHOLINE [J].
BONDAR, OP ;
MELNYKOVYCH, G ;
ROWE, ES .
CHEMISTRY AND PHYSICS OF LIPIDS, 1994, 74 (01) :93-98
[3]   Crystallography & NMR system:: A new software suite for macromolecular structure determination [J].
Brunger, AT ;
Adams, PD ;
Clore, GM ;
DeLano, WL ;
Gros, P ;
Grosse-Kunstleve, RW ;
Jiang, JS ;
Kuszewski, J ;
Nilges, M ;
Pannu, NS ;
Read, RJ ;
Rice, LM ;
Simonson, T ;
Warren, GL .
ACTA CRYSTALLOGRAPHICA SECTION D-BIOLOGICAL CRYSTALLOGRAPHY, 1998, 54 :905-921
[4]   A RED PIGMENT PRODUCED BY AEROBIC SPOREFORMING BACTERIA [J].
CANALEPAROLA, E .
ARCHIV FUR MIKROBIOLOGIE, 1963, 46 (04) :414-&
[5]   Structural biology and chemistry of the terpenoid cyclases [J].
Christianson, David W. .
CHEMICAL REVIEWS, 2006, 106 (08) :3412-3442
[6]   Staphyloxanthin plays a role in the fitness of Staphylococcus aureus and its ability to cope with oxidative stress [J].
Clauditz, Alexandra ;
Resch, Alexandra ;
Wieland, Karsten-Peter ;
Peschel, Andreas ;
Goetz, Friedrich .
INFECTION AND IMMUNITY, 2006, 74 (08) :4950-4953
[7]   MEMBRANE LIPID-COMPOSITION OF OBLIGATELY AND FACULTATIVELY ALKALOPHILIC STRAINS OF BACILLUS SPP [J].
CLEJAN, S ;
KRULWICH, TA ;
MONDRUS, KR ;
SETOYOUNG, D .
JOURNAL OF BACTERIOLOGY, 1986, 168 (01) :334-340
[8]   Coot:: model-building tools for molecular graphics [J].
Emsley, P ;
Cowtan, K .
ACTA CRYSTALLOGRAPHICA SECTION D-STRUCTURAL BIOLOGY, 2004, 60 :2126-2132
[9]   Farnesol and geranylgeraniol modulate the structural properties of phosphatidylethanolamine model membranes [J].
Funari, SS ;
Prades, J ;
Escribá, PV ;
Barceló, F .
MOLECULAR MEMBRANE BIOLOGY, 2005, 22 (04) :303-311
[10]   Function-structure studies and identification of three enzyme domains involved in the catalytic activity in rat hepatic squalene synthase [J].
Gu, PD ;
Ishii, Y ;
Spencer, TA ;
Shechter, I .
JOURNAL OF BIOLOGICAL CHEMISTRY, 1998, 273 (20) :12515-12525