An extreme halophilic xylanase from camel rumen metagenome with elevated catalytic activity in high salt concentrations

被引:27
作者
Ghadikolaei, Kamran Khalili [1 ]
Sangachini, Elham Dasi [1 ]
Vahdatirad, Vasimeh [1 ]
Noghabi, Kambiz Akbari [1 ]
Zahiri, Hossein Shahbani [1 ]
机构
[1] NIGEB, Dept Energy & Environm Biotechnol, Tehran, Iran
关键词
Xylanase; Halophilic; Extreme; Plant biomass; PULLULANS NRRL Y-2311-1; GENES; PURIFICATION; PRETREATMENT; DOMAINS; STEP;
D O I
10.1186/s13568-019-0809-2
中图分类号
Q81 [生物工程学(生物技术)]; Q93 [微生物学];
学科分类号
071005 ; 0836 ; 090102 ; 100705 ;
摘要
An extreme halophilic xylanase, designated as XylCMS, was characterized by cloning and expression of the encoding gene from a camel rumen metagenome. XylCMS proved to be a GH11 xylanase with high identity to a hypothetical glycosyl hydrolase from Ruminococcus flavefaciens. XylCMS with a molecular weight of about 47kDa showed maximum activity at pH 6 and 55 degrees C. The enzyme activity was significantly stimulated by NaCl in 1-5M concentrations. Interestingly, the optimum temperature was not influenced by NaCl but the K-cat of the enzyme was enhanced by 2.7-folds at 37 degrees C and 1.2-folds at 55 degrees C. The K-m value was decreased with NaCl by 4.3-folds at 37 degrees C and 3.7-folds at 55 degrees C resulting in a significant increase in catalytic efficiency (K-cat/K-m) by 11.5-folds at 37 degrees C and 4.4-folds at 55 degrees C. Thermodynamic analysis indicated that the activation energy (E-a) and enthalpy (H) of the reaction were decreased with NaCl by 2.4 and threefold, respectively. From the observations and the results of fluorescence spectroscopy, it was concluded that NaCl at high concentrations improves both the flexibility and substrate affinity of XylCMS that are crucial for catalytic activity by influencing substrate binding, product release and the energy barriers of the reaction. XylCMS as an extreme halophilic xylanase with stimulated activity in artificial seawater and low water activity conditions has potentials for application in industrial biotechnology.
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页数:11
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共 35 条
  • [1] Production, Characterization and Application of a Xylanase from Streptomyces sp AOA40 in Fruit Juice and Bakery Industries
    Adiguzel, Ali Osman
    Tuncer, Munir
    [J]. FOOD BIOTECHNOLOGY, 2016, 30 (03) : 189 - 218
  • [2] Carli S., 2016, J. Mol. Catal. B: Enzym., V133, pS508, DOI DOI 10.1016/J.MOLCATB.2017.05.002
  • [3] Next generation industrial biotechnology based on extremophilic bacteria
    Chen, Guo-Qiang
    Jiang, Xiao-Ran
    [J]. CURRENT OPINION IN BIOTECHNOLOGY, 2018, 50 : 94 - 100
  • [4] Novel Xylanase from a Holstein Cattle Rumen Metagenomic Library and Its Application in Xylooligosaccharide and Ferulic Acid Production from Wheat Straw
    Cheng, Fansheng
    Sheng, Jiping
    Dong, Rubo
    Men, Yejun
    Gan, Lin
    Shen, Lin
    [J]. JOURNAL OF AGRICULTURAL AND FOOD CHEMISTRY, 2012, 60 (51) : 12516 - 12524
  • [5] Isolation and partial characterization of novel genes encoding acidic cellulases from metagenomes of buffalo rumens
    Duan, C. -J.
    Xian, L.
    Zhao, G. -C.
    Feng, Y.
    Pang, H.
    Bai, X. -L.
    Tang, J. -L.
    Ma, Q. -S.
    Feng, J. -X.
    [J]. JOURNAL OF APPLIED MICROBIOLOGY, 2009, 107 (01) : 245 - 256
  • [6] The application of the theory of absolute reaction rates to proteins
    Eyring, H
    Stearn, AE
    [J]. CHEMICAL REVIEWS, 1939, 24 (02) : 253 - 270
  • [7] Seawater as Alternative to Freshwater in Pretreatment of Date Palm Residues for Bioethanol Production in Coastal and/or Arid Areas
    Fang, Chuanji
    Thomsen, Mette Hedegaard
    Brudecki, Grzegorz P.
    Cybulska, Iwona
    Frankaer, Christian Grundahl
    Bastidas-Oyanedel, Juan-Rodrigo
    Schmidt, Jens Ejbye
    [J]. CHEMSUSCHEM, 2015, 8 (22) : 3823 - 3831
  • [8] MOLECULAR-CLONING OF GENES FROM RUMINOCOCCUS-FLAVEFACIENS ENCODING XYLANASE AND BETA-(1-3,1-4)GLUCANASE ACTIVITIES
    FLINT, HJ
    MCPHERSON, CA
    BISSET, J
    [J]. APPLIED AND ENVIRONMENTAL MICROBIOLOGY, 1989, 55 (05) : 1230 - 1233
  • [9] A BIFUNCTIONAL ENZYME, WITH SEPARATE XYLANASE AND BETA(1,3-1,4)-GLUCANASE DOMAINS, ENCODED BY THE XYND GENE OF RUMINOCOCCUS-FLAVEFACIENS
    FLINT, HJ
    MARTIN, J
    MCPHERSON, CA
    DANIEL, AS
    ZHANG, JX
    [J]. JOURNAL OF BACTERIOLOGY, 1993, 175 (10) : 2943 - 2951
  • [10] A cold-adapted endoglucanase from camel rumen with high catalytic activity at moderate and low temperatures: an anomaly of truly cold-adapted evolution in a mesophilic environment
    Ghadikolaei, Kamran Khalili
    Gharechahi, Javad
    Haghbeen, Kamahldin
    Noghabi, Kambiz Akbari
    Salekdeh, Ghasem Hosseini
    Zahiri, Hossein Shahbani
    [J]. EXTREMOPHILES, 2018, 22 (02) : 315 - 326