Accessing the structural and thermodynamic properties of ultra-thin layers of C32 adsorbed on a SiO2 surface

被引:4
作者
Gutierrez-Maldonado, Sebastian E. [1 ,2 ]
Antonio Garate, Jose [1 ,2 ]
Jose Retamal, Maria [3 ,4 ]
Cisternas, Marcelo A. [3 ,4 ]
Volkmann, Ulrich G. [3 ,4 ]
Perez-Acle, Tomas [1 ,2 ]
机构
[1] Fdn Ciencia & Vida, Computat Biol Lab DLab, Av Zanartu 1482,PO 7780272, Santiago, Region Metropol, Chile
[2] CINV, Pasaje Harrington 287, Valparaiso, Chile
[3] Pontificia Univ Catolica Chile, Inst Fis, Lab Superficies SurfLab, Av Vicuna Mackenna 4860, Santiago, Chile
[4] Pontificia Univ Catolica Chile, Ctr Invest Nanotecnol & Mat Avanzados CIEN UC, Av Vicuna Mackenna 4860, Santiago, Chile
关键词
MOLECULAR-DYNAMICS SIMULATIONS; X-RAY REFLECTIVITY; LIQUID N-ALKANES; SOLID-SURFACE; FORCE-FIELD; GROWTH MODE; FILMS; INTERFACES; GRAPHITE; PHASE;
D O I
10.1016/j.cplett.2017.01.065
中图分类号
O64 [物理化学(理论化学)、化学物理学];
学科分类号
070304 ; 081704 ;
摘要
Medium-chain alkanes are important molecules with applications in biology and industry. Notably, their structural properties are scarcely understood. To assess structural and thermodynamic properties of dotriacontane (C32) molecules adsorbed on a SiO2 surface, we conducted all-atom molecular dynamics (MD) simulations. By analyzing potentials of mean force, order parameters and self-diffusion, we compared the stability and preferential orientation between ordered and disordered systems. Our data confirm the presence of one parallel layer of C32 followed by a mixture of disordered C32 segments exhibiting no thermodynamic preference. This semi-ordered structural model shed light to the interactions between C32 and a SiO2 surface. (C) 2017 Elsevier B.V. All rights reserved.
引用
收藏
页码:64 / 70
页数:7
相关论文
共 43 条
[1]   Liquid-vapor equilibria and interfacial properties of n-alkanes and perfluoroalkanes by molecular simulation [J].
Amat, Miguel A. ;
Rutledge, Gregory C. .
JOURNAL OF CHEMICAL PHYSICS, 2010, 132 (11)
[2]   Nanoscale observation of delayering in alkane films [J].
Bai, M. ;
Knorr, K. ;
Simpson, M. J. ;
Trogisch, S. ;
Taub, H. ;
Ehrlich, S. N. ;
Mo, H. ;
Volkmann, U. G. ;
Hansen, F. Y. .
EPL, 2007, 79 (02)
[3]   In-situ X-ray reflectivity study of alkane films grown from the vapor phase [J].
Basu, S. ;
Satija, S. K. .
LANGMUIR, 2007, 23 (16) :8331-8335
[4]   Modulating the import of medium-chain alkanes in E. coli through tuned expression of FadL [J].
Call, Toby P. ;
Akhtar, M. Kalim ;
Baganz, Frank ;
Grant, Chris .
JOURNAL OF BIOLOGICAL ENGINEERING, 2016, 10
[5]   Explicit hydrogen molecular dynamics simulations of hexane deposited onto graphite at various coverages [J].
Connolly, M. J. ;
Roth, M. W. ;
Gray, Paul A. ;
Wexler, Carlos .
LANGMUIR, 2008, 24 (07) :3228-3234
[6]   Water-silica force field for simulating nanodevices [J].
Cruz-Chu, Eduardo R. ;
Aksimentiev, Aleksei ;
Schulten, Klaus .
JOURNAL OF PHYSICAL CHEMISTRY B, 2006, 110 (43) :21497-21508
[7]   Structure and Growth of Vapor-Deposited n-Dotriacontane Films Studied by X-ray Reflectivity [J].
del Campo, Valeria ;
Cisternas, Edgardo ;
Taub, Haskell ;
Vergara, Ignacio ;
Corrales, Tomas ;
Soza, Pamela ;
Volkmann, Ulrich G. ;
Bai, Mengjun ;
Wang, Siao-Kwan ;
Hansen, Flemming Y. ;
Mo, Haiding ;
Ehrlich, Steven N. .
LANGMUIR, 2009, 25 (22) :12962-12967
[8]   Structure and phase transitions of monolayers of intermediate-length n-alkanes on graphite studied by neutron diffraction and molecular dynamics simulation [J].
Diama, A. ;
Matthies, B. ;
Herwig, K. W. ;
Hansen, F. Y. ;
Criswell, L. ;
Mo, H. ;
Bai, M. ;
Taub, H. .
JOURNAL OF CHEMICAL PHYSICS, 2009, 131 (08)
[9]   Comparative study of normal and branched alkane monolayer films adsorbed on a solid surface. I. Structure [J].
Enevoldsen, A. D. ;
Hansen, F. Y. ;
Diama, A. ;
Criswell, L. ;
Taub, H. .
JOURNAL OF CHEMICAL PHYSICS, 2007, 126 (10)
[10]   Structural and Phase Properties of Tetracosane (C24H50) Monolayers Adsorbed on Graphite: An Explicit Hydrogen Molecular Dynamics Study [J].
Firlej, L. ;
Kuchta, B. ;
Roth, M. W. ;
Connolly, M. J. ;
Wexler, Carlos .
LANGMUIR, 2008, 24 (21) :12392-12397