In-Situ Feature Extraction of Large Scale Combustion Simulations Using Segmented Merge Trees

被引:39
作者
Landge, Aaditya G. [1 ]
Pascucci, Valerio [1 ]
Gyulassy, Attila [1 ]
Bennett, Janine C. [2 ]
Kolla, Hemanth [2 ]
Chen, Jacqueline [2 ]
Bremer, Peer-Timo [1 ,3 ]
机构
[1] Univ Utah, SCI Inst, Salt Lake City, UT 84112 USA
[2] Lawrence Livermore Natl Lab, Livermore, CA USA
[3] Sandia Natl Labs, Livermore, CA USA
来源
SC14: INTERNATIONAL CONFERENCE FOR HIGH PERFORMANCE COMPUTING, NETWORKING, STORAGE AND ANALYSIS | 2014年
关键词
topological data analysis; feature extraction; in situ analysis; merge tree computation; segmented merge tree;
D O I
10.1109/SC.2014.88
中图分类号
TP301 [理论、方法];
学科分类号
081202 ;
摘要
The ever increasing amount of data generated by scientific simulations coupled with system I/O constraints are fueling a need for in-situ analysis techniques. Of particular interest are approaches that produce reduced data representations while maintaining the ability to redefine, extract, and study features in a post-process to obtain scientific insights. This paper presents two variants of in-situ feature extraction techniques using segmented merge trees, which encode a wide range of threshold based features. The first approach is a fast, low communication cost technique that generates an exact solution but has limited scalability. The second is a scalable, local approximation that nevertheless is guaranteed to correctly extract all features up to a predefined size. We demonstrate both variants using some of the largest combustion simulations available on leadership class supercomputers. Our approach allows state-of-the-art, feature-based analysis to be performed in-situ at significantly higher frequency than currently possible and with negligible impact on the overall simulation runtime.
引用
收藏
页码:1020 / 1031
页数:12
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