From crystal to compound: structure-based antimalarial drug discovery

被引:18
作者
Drinkwater, Nyssa [1 ]
McGowan, Sheena [1 ]
机构
[1] Monash Univ, Dept Biochem & Mol Biol, Melbourne, Vic 3800, Australia
基金
英国医学研究理事会; 澳大利亚研究理事会;
关键词
antimalarial; drug discovery; malaria; Plasmodium falciparum; structural biology; ACYL CARRIER PROTEIN; FALCIPARUM DIHYDROOROTATE DEHYDROGENASE; TRANSITION-STATE ANALOG; ACYCLIC NUCLEOSIDE PHOSPHONATES; PARASITE PLASMODIUM-FALCIPARUM; ENOYL-ACP-REDUCTASE; HYPOXANTHINE-GUANINE PHOSPHORIBOSYLTRANSFERASE; GERANYLGERANYL DIPHOSPHATE SYNTHASE; ARTEMISININ-RESISTANT MALARIA; SMALL-MOLECULE INHIBITORS;
D O I
10.1042/BJ20140240
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
Despite a century of control and eradication campaigns, malaria remains one of the world's most devastating diseases. Our once-powerful therapeutic weapons are losing the war against the Plasmodium parasite, whose ability to rapidly develop and spread drug resistance hamper past and present malaria-control efforts. Finding new and effective treatments for malaria is now a top global health priority, fuelling an increase in funding and promoting open-source collaborations between researchers and pharmaceutical consortia around the world. The result of this is rapid advances in drug discovery approaches and technologies, with three major methods for antimalarial drug development emerging: (i) chemistry-based, (ii) target-based, and (iii) cell-based. Common to all three of these approaches is the unique ability of structural biology to inform and accelerate drug development. Where possible, SBDD (structure-based drug discovery) is a foundation for antimalarial drug development programmes, and has been invaluable to the development of a number of current pre-clinical and clinical candidates. However, as we expand our understanding of the malarial life cycle and mechanisms of resistance development, SBDD as a field must continue to evolve in order to develop compounds that adhere to the ideal characteristics for novel antimalarial therapeutics and to avoid high attrition rates pre- and post-clinic. In the present review, we aim to examine the contribution that SBDD has made to current antimalarial drug development efforts, covering hit discovery to lead optimization and prevention of parasite resistance. Finally, the potential for structural biology, particularly high-throughput structural genomics programmes, to identify future targets for drug discovery are discussed.
引用
收藏
页码:349 / 369
页数:21
相关论文
共 267 条
[1]   Structural Insights into Substrate Binding by PvFKBP35, a Peptidylprolyl cis-trans Isomerase from the Human Malarial Parasite Plasmodium vivax [J].
Alag, Reema ;
Balakrishna, Asha Manikkoth ;
Rajan, Sreekanth ;
Qureshi, Insaf A. ;
Shin, Joon ;
Lescar, Julien ;
Grueber, Gerhard ;
Yoon, Ho Sup .
EUKARYOTIC CELL, 2013, 12 (04) :627-634
[2]   NMR and crystallographic structures of the FK506 binding domain of human malarial parasite Plasmodium vivax FKBP35 [J].
Alag, Reema ;
Qureshi, Insaf A. ;
Bharatham, Nagakumar ;
Shin, Joon ;
Lescar, Julien ;
Yoon, Ho Sup .
PROTEIN SCIENCE, 2010, 19 (08) :1577-1586
[3]   Crystallographic structure of the tetratricopeptide repeat domain of Plasmodium falciparum FKBP35 and its molecular interaction with Hsp90 C-terminal pentapeptide [J].
Alag, Reema ;
Bharatham, Nagakumar ;
Dong, Aiping ;
Hills, Tanya ;
Harikishore, Amaravadhi ;
Widjaja, Anissa Anindya ;
Shochat, Susana Geifman ;
Hui, Raymond ;
Yoon, Ho Sup .
PROTEIN SCIENCE, 2009, 18 (10) :2115-2124
[4]   Molecular Basis for Drug Resistance in HIV-1 Protease [J].
Ali, Akbar ;
Bandaranayake, Rajintha M. ;
Cai, Yufeng ;
King, Nancy M. ;
Kolli, Madhavi ;
Mittal, Seema ;
Murzycki, Jennifer F. ;
Nalam, Madhavi N. L. ;
Nalivaika, Ellen A. ;
Oezen, Ayseguel ;
Prabu-Jeyabalan, Moses M. ;
Thayer, Kelly ;
Schiffer, Celia A. .
VIRUSES-BASEL, 2010, 2 (11) :2509-2535
[5]   New Targets, New Hope: Novel Drug Targets for Curbing Malaria [J].
Arora, N. ;
Banerjee, A. K. .
MINI-REVIEWS IN MEDICINAL CHEMISTRY, 2012, 12 (03) :210-226
[6]   Molecular Characterization of a Novel Geranylgeranyl Pyrophosphate Synthase from Plasmodium Parasites [J].
Artz, Jennifer D. ;
Wernimont, Amy K. ;
Dunford, James E. ;
Schapira, Matthieu ;
Dong, Aiping ;
Zhao, Yong ;
Lew, Jocelyne ;
Russell, R. Graham G. ;
Ebetino, F. Hal ;
Oppermann, Udo ;
Hui, Raymond .
JOURNAL OF BIOLOGICAL CHEMISTRY, 2011, 286 (05) :3315-3322
[7]   Targeting a Uniquely Nonspecific Prenyl Synthase with Bisphosphonates to Combat Cryptosporidiosis [J].
Artz, Jennifer D. ;
Dunford, James E. ;
Arrowood, Michael J. ;
Dong, Aiping ;
Chruszcz, Maksymilian ;
Kavanagh, Kathryn L. ;
Minor, Wladek ;
Russell, R. Graham G. ;
Ebetino, F. Hal ;
Oppermann, Udo ;
Hui, Raymond .
CHEMISTRY & BIOLOGY, 2008, 15 (12) :1296-1306
[8]   Potent Inhibitors of Malarial Aspartic Proteases, the Plasmepsins, by Hydroformylation of Substituted 7-Azanorbornenes [J].
Aureggi, Valentina ;
Ehmke, Veronika ;
Wieland, Joerg ;
Schweizer, W. Bernd ;
Bernet, Bruno ;
Bur, Daniel ;
Meyer, Solange ;
Rottmann, Matthias ;
Freymond, Celine ;
Brun, Reto ;
Breit, Bernhard ;
Diederich, Francois .
CHEMISTRY-A EUROPEAN JOURNAL, 2013, 19 (01) :155-164
[9]   Inhibition of Mn-2(2+)-arginase by borate leads to the design of a transition state analogue inhibitor, 2(S)-amino-6-boronohexanoic acid [J].
Baggio, R ;
Elbaum, D ;
Kanyo, ZF ;
Carroll, PJ ;
Cavalli, RC ;
Ash, DE ;
Christianson, DW .
JOURNAL OF THE AMERICAN CHEMICAL SOCIETY, 1997, 119 (34) :8107-8108
[10]   Structure of AMA1 from Plasmodium falciparum reveals a clustering of polymorphisms that surround a conserved hydrophobic pocket [J].
Bai, T ;
Becker, M ;
Gupta, A ;
Strike, P ;
Murphy, VJ ;
Anders, RF ;
Batchelor, AH .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 2005, 102 (36) :12736-12741