m6A Demethylase ALKBH5 Maintains Tumorigenicity of Glioblastoma Stem-like Cells by Sustaining FOXM1 Expression and Cell Proliferation Program

被引:1266
作者
Zhang, Sicong [1 ,2 ]
Zhao, Boxuan Simen [3 ,4 ,5 ]
Zhou, Aidong [1 ]
Lin, Kangyu [1 ]
Zheng, Shaoping [1 ]
Lu, Zhike [3 ,4 ,5 ]
Chen, Yaohui [1 ]
Sulman, Erik P. [6 ]
Xie, Keping [2 ,7 ]
Bogler, Oliver [1 ,2 ]
Majumder, Sadhan [8 ]
He, Chuan [3 ,4 ,5 ,9 ]
Huang, Suyun [1 ,2 ]
机构
[1] Univ Texas MD Anderson Canc Ctr, Dept Neurosurg, Houston, TX 77030 USA
[2] Univ Texas MD Anderson Canc Ctr, Program Canc Biol, UTHlth Grad Sch Biomed Sci, Houston, TX 77030 USA
[3] Univ Chicago, Dept Chem, 5735 S Ellis Ave, Chicago, IL 60637 USA
[4] Univ Chicago, Inst Biophys Dynam, Chicago, IL 60637 USA
[5] Univ Chicago, Howard Hughes Med Inst, 5841 S Maryland Ave, Chicago, IL 60637 USA
[6] Univ Texas MD Anderson Canc Ctr, Dept Radiat Oncol, Houston, TX 77030 USA
[7] Univ Texas MD Anderson Canc Ctr, Dept Gastroenterol Hepatol & Nutr, Houston, TX 77030 USA
[8] Univ Texas MD Anderson Canc Ctr, Dept Genet, Houston, TX 77030 USA
[9] Univ Chicago, Dept Biochem & Mol Biol, 920 E 58Th St, Chicago, IL 60637 USA
关键词
MESSENGER-RNA METHYLATION; NUCLEAR-RNA; CROSS-LINKING; PROMOTES; N-6-METHYLADENOSINE; REVEALS; TRANSCRIPTION; TRANSLATION; PROTECTS; TARGET;
D O I
10.1016/j.ccell.2017.02.013
中图分类号
R73 [肿瘤学];
学科分类号
100214 ;
摘要
The dynamic and reversible N-6-methyladenosine (m(6)A) RNA modification installed and erased by N-6-methyltransferases and demethylases regulates gene expression and cell fate. We show that the m(6)A demethylase ALKBH5 is highly expressed in glioblastoma stem-like cells (GSCs). Silencing ALKBH5 suppresses the proliferation of patient-derived GSCs. Integrated transcriptome and m(6)A-seq analyses revealed altered expression of certain ALKBH5 target genes, including the transcription factor FOXM1. ALKBH5 demethylates FOXM1 nascent transcripts, leading to enhanced FOXM1 expression. Furthermore, a long non-coding RNA antisense to FOXM1 (FOXM1-AS) promotes the interaction of ALKBH5 with FOXM1 nascent transcripts. Depleting ALKBH5 and FOXM1-AS disrupted GSC tumorigenesis through the FOXM1 axis. Our work uncovers a critical function for ALKBH5 and provides insight into critical roles of m(6)A methylation in glioblastoma.
引用
收藏
页码:591 / +
页数:22
相关论文
共 50 条
[1]   Coordination of m6A mRNA Methylation and Gene Transcription by ZFP217 Regulates Pluripotency and Reprogramming [J].
Aguilo, Francesca ;
Zhang, Fan ;
Sancho, Ana ;
Fidalgo, Miguel ;
Di Cecilia, Serena ;
Vashisht, Ajay ;
Lee, Dung-Fang ;
Chen, Chih-Hung ;
Rengasamy, Madhumitha ;
Andino, Blanca ;
Jahouh, Farid ;
Roman, Angel ;
Krig, Sheryl R. ;
Wang, Rong ;
Zhang, Weijia ;
Wohlschlegel, James A. ;
Wang, Jianlong ;
Walsh, Martin J. .
CELL STEM CELL, 2015, 17 (06) :689-704
[2]   Total RNA sequencing reveals nascent transcription and widespread co-transcriptional splicing in the human brain [J].
Ameur, Adam ;
Zaghlool, Ammar ;
Halvardson, Jonatan ;
Wetterbom, Anna ;
Gyllensten, Ulf ;
Cavelier, Lucia ;
Feuk, Lars .
NATURE STRUCTURAL & MOLECULAR BIOLOGY, 2011, 18 (12) :1435-U157
[3]   m6A RNA Modification Controls Cell Fate Transition in Mammalian Embryonic Stem Cells [J].
Batista, Pedro J. ;
Molinie, Benoit ;
Wang, Jinkai ;
Qu, Kun ;
Zhang, Jiajing ;
Li, Lingjie ;
Bouley, Donna M. ;
Lujan, Ernesto ;
Haddad, Bahareh ;
Daneshvar, Kaveh ;
Carter, Ava C. ;
Flynn, Ryan A. ;
Zhou, Chan ;
Lim, Kok-Seong ;
Dedon, Peter ;
Wernig, Marius ;
Mullen, Alan C. ;
Xing, Yi ;
Giallourakis, Cosmas C. ;
Chang, Howard Y. .
CELL STEM CELL, 2014, 15 (06) :707-719
[4]   Mesenchymal Differentiation Mediated by NF-κB Promotes Radiation Resistance in Glioblastoma [J].
Bhat, Krishna P. L. ;
Balasubramaniyan, Veerakumar ;
Vaillant, Brian ;
Ezhilarasan, Ravesanker ;
Hummelink, Karlijn ;
Hollingsworth, Faith ;
Wani, Khalida ;
Heathcock, Lindsey ;
James, Johanna D. ;
Goodman, Lindsey D. ;
Conroy, Siobhan ;
Long, Lihong ;
Lelic, Nina ;
Wang, Suzhen ;
Gumin, Joy ;
Raj, Divya ;
Kodama, Yoshinori ;
Raghunathan, Aditya ;
Olar, Adriana ;
Joshi, Kaushal ;
Pelloski, Christopher E. ;
Heimberger, Amy ;
Kim, Se Hoon ;
Cahill, Daniel P. ;
Rao, Ganesh ;
Den Dunnen, Wilfred F. A. ;
Boddeke, Hendrikus W. G. M. ;
Phillips, Heidi S. ;
Nakano, Ichiro ;
Lang, Frederick F. ;
Colman, Howard ;
Sulman, Erik P. ;
Aldape, Kenneth .
CANCER CELL, 2013, 24 (03) :331-346
[5]   The Somatic Genomic Landscape of Glioblastoma [J].
Brennan, Cameron W. ;
Verhaak, Roel G. W. ;
McKenna, Aaron ;
Campos, Benito ;
Noushmehr, Houtan ;
Salama, Sofie R. ;
Zheng, Siyuan ;
Chakravarty, Debyani ;
Sanborn, J. Zachary ;
Berman, Samuel H. ;
Beroukhim, Rameen ;
Bernard, Brady ;
Wu, Chang-Jiun ;
Genovese, Giannicola ;
Shmulevich, Ilya ;
Barnholtz-Sloan, Jill ;
Zou, Lihua ;
Vegesna, Rahulsimham ;
Shukla, Sachet A. ;
Ciriello, Giovanni ;
Yung, W. K. ;
Zhang, Wei ;
Sougnez, Carrie ;
Mikkelsen, Tom ;
Aldape, Kenneth ;
Bigner, Darell D. ;
Van Meir, Erwin G. ;
Prados, Michael ;
Sloan, Andrew ;
Black, Keith L. ;
Eschbacher, Jennifer ;
Finocchiaro, Gaetano ;
Friedman, William ;
Andrews, David W. ;
Guha, Abhijit ;
Iacocca, Mary ;
O'Neill, Brian P. ;
Foltz, Greg ;
Myers, Jerome ;
Weisenberger, Daniel J. ;
Penny, Robert ;
Kucherlapati, Raju ;
Perou, Charles M. ;
Hayes, D. Neil ;
Gibbs, Richard ;
Marra, Marco ;
Mills, Gordon B. ;
Lander, Eric ;
Spellman, Paul ;
Wilson, Richard .
CELL, 2013, 155 (02) :462-477
[7]   High-Resolution N6-Methyladenosine (m6A) Map Using Photo-Crosslinking-Assisted m6A Sequencing [J].
Chen, Kai ;
Lu, Zhike ;
Wang, Xiao ;
Fu, Ye ;
Luo, Guan-Zheng ;
Liu, Nian ;
Han, Dali ;
Dominissini, Dan ;
Dai, Qing ;
Pan, Tao ;
He, Chuan .
ANGEWANDTE CHEMIE-INTERNATIONAL EDITION, 2015, 54 (05) :1587-1590
[8]   m6A RNA Methylation Is Regulated by MicroRNAs and Promotes Reprogramming to Pluripotency [J].
Chen, Tong ;
Hao, Ya-Juan ;
Zhang, Ying ;
Li, Miao-Miao ;
Wang, Meng ;
Han, Weifang ;
Wu, Yongsheng ;
Lv, Ying ;
Hao, Jie ;
Wang, Libin ;
Li, Ang ;
Yang, Ying ;
Jin, Kang-Xuan ;
Zhao, Xu ;
Li, Yuhuan ;
Ping, Xiao-Li ;
Lai, Wei-Yi ;
Wu, Li-Gang ;
Jiang, Guibin ;
Wang, Hai-Lin ;
Sang, Lisi ;
Wang, Xiu-Jie ;
Yang, Yun-Gui ;
Zhou, Qi .
CELL STEM CELL, 2015, 16 (03) :289-301
[9]   IDENTIFICATION OF METHYLATED NUCLEOSIDES IN MESSENGER-RNA FROM NOVIKOFF HEPATOMA-CELLS [J].
DESROSIERS, R ;
FRIDERICI, K ;
ROTTMAN, F .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 1974, 71 (10) :3971-3975
[10]   Transcriptome-wide mapping of N6-methyladenosine by m6A-seq based on immunocapturing and massively parallel sequencing [J].
Dominissini, Dan ;
Moshitch-Moshkovitz, Sharon ;
Salmon-Divon, Mali ;
Amariglio, Ninette ;
Rechavi, Gideon .
NATURE PROTOCOLS, 2013, 8 (01) :176-189