Comparative Analysis and Limitations of Ethidium Monoazide and Propidium Monoazide Treatments for the Differentiation of Viable and Nonviable Campylobacter Cells

被引:57
作者
Seinige, Diana [1 ]
Krischek, Carsten [1 ]
Klein, Guenter [1 ]
Kehrenberg, Corinna [1 ]
机构
[1] Univ Vet Med Hannover, Inst Food Qual & Food Safety, Hannover, Germany
关键词
REAL-TIME PCR; LISTERIA-MONOCYTOGENES CELLS; PREFERENTIAL DETECTION; DEAD CAMPYLOBACTER; CHICKEN CARCASSES; QUANTITATIVE PCR; JEJUNI; QUANTIFICATION; ASSAY; COLI;
D O I
10.1128/AEM.03962-13
中图分类号
Q81 [生物工程学(生物技术)]; Q93 [微生物学];
学科分类号
071005 ; 0836 ; 090102 ; 100705 ;
摘要
The lack of differentiation between viable and nonviable bacterial cells limits the implementation of PCR-based methods for routine diagnostic approaches. Recently, the combination of a quantitative real-time PCR (qPCR) and ethidium monoazide (EMA) or propidium monoazide (PMA) pretreatment has been described to circumvent this disadvantage. In regard to the suitability of this approach for Campylobacter spp., conflicting results have been reported. Thus, we compared the suitabilities of EMA and PMA in various concentrations for a Campylobacter viability qPCR method. The presence of either intercalating dye, EMA or PMA, leads to concentration-dependent shifts toward higher threshold cycle (C-T) values, especially after EMA treatment. However, regression analysis resulted in high correlation coefficient (R-2) values of 0.99 (EMA) and 0.98 (PMA) between Campylobacter counts determined by qPCR and culture-based enumeration. EMA (10 mu g/ml) and PMA (51.10 mu g/ml) removed DNA selectively from nonviable cells in mixed samples at viable/nonviable ratios of up to 1:1,000. The optimized EMA protocol was successfully applied to 16 Campylobacter jejuni and Campylobacter coli field isolates from poultry and indicated the applicability for field isolates as well. EMA-qPCR and culture-based enumeration of Campylobacter spiked chicken leg quarters resulted in comparable bacterial cell counts. The correlation coefficient between the two analytical methods was 0.95. Nevertheless, larger amounts of nonviable cells (>10(4)) resulted in an incomplete qPCR signal reduction, representing a serious methodological limitation, but double staining with EMA considerably improved the signal inhibition. Hence, the proposed Campylobacter viability EMA-qPCR provides a promising rapid method for diagnostic applications, but further research is needed to circumvent the limitation.
引用
收藏
页码:2186 / 2192
页数:7
相关论文
共 33 条
[1]   Viability Determination of Helicobacter pylori Using Propidium Monoazide Quantitative PCR [J].
Agusti, Gemma ;
Codony, Francesc ;
Fittipaldi, Mariana ;
Adrados, Barbara ;
Morato, Jordi .
HELICOBACTER, 2010, 15 (05) :473-476
[2]   Discrimination of Viable and Dead Fecal Bacteroidales Bacteria by Quantitative PCR with Propidium Monoazide [J].
Bae, Sungwoo ;
Wuertz, Stefan .
APPLIED AND ENVIRONMENTAL MICROBIOLOGY, 2009, 75 (09) :2940-2944
[3]   Long-amplicon propidium monoazide-PCR enumeration assay to detect viable Campylobacter and Salmonella [J].
Banihashemi, A. ;
Van Dyke, M. I. ;
Huck, P. M. .
JOURNAL OF APPLIED MICROBIOLOGY, 2012, 113 (04) :863-873
[4]   Applicability of a rapid duplex real-time PCR assay for speciation of Campylobacter jejuni and Campylobacter coli directly from culture plates [J].
Best, EL ;
Powell, EJ ;
Swift, C ;
Grant, KA ;
Frost, JA .
FEMS MICROBIOLOGY LETTERS, 2003, 229 (02) :237-241
[5]   Quantification of Campylobacter spp. in chicken carcass rinse by real-time PCR [J].
Botteldoorn, N. ;
Van Coillie, E. ;
Piessens, V. ;
Rasschaert, G. ;
Debruyne, L. ;
Heyndrickx, M. ;
Herman, L. ;
Messens, W. .
JOURNAL OF APPLIED MICROBIOLOGY, 2008, 105 (06) :1909-1918
[6]   Cryptosporidium Propidium Monoazide-PCR, a Molecular Biology-Based Technique for Genotyping of Viable Cryptosporidium Oocysts [J].
Brescia, Cristin C. ;
Griffin, Shannon M. ;
Ware, Michael W. ;
Varughese, Eunice A. ;
Egorov, Andrey I. ;
Villegas, Eric N. .
APPLIED AND ENVIRONMENTAL MICROBIOLOGY, 2009, 75 (21) :6856-6863
[7]   Reverse transcriptase real-time PCR for detection and quantification of viable Campylobacter jejuni directly from poultry faecal samples [J].
Bui, Xuan Thanh ;
Wolff, Anders ;
Madsen, Mogens ;
Bang, Dang Duong .
RESEARCH IN MICROBIOLOGY, 2012, 163 (01) :64-72
[8]   Selective PCR detection of viable Enterobacter sakazakii cells utilizing propidium monoazide or ethidium bromide monoazide [J].
Cawthorn, D. -M. ;
Witthuhn, R. C. .
JOURNAL OF APPLIED MICROBIOLOGY, 2008, 105 (04) :1178-1185
[9]   Nucleic acids as viability markers for bacteria detection using molecular tools [J].
Cenciarini-Borde, Claire ;
Courtois, Sophie ;
La Scola, Bernard .
FUTURE MICROBIOLOGY, 2009, 4 (01) :45-64
[10]  
Chang B, 2010, JPN J INFECT DIS, V63, P119