Structural and Functional Characterization of the α-Tubulin Acetyltransferase MEC-17

被引:22
作者
Davenport, Andrew M. [1 ]
Collins, Leslie N. [1 ]
Chiu, Hui [2 ]
Minor, Paul J. [2 ]
Sternberg, Paul W. [2 ]
Hoelz, Andre [1 ]
机构
[1] CALTECH, Div Chem & Chem Engn, Pasadena, CA 91125 USA
[2] CALTECH, Howard Hughes Med Inst, Div Biol & Biol Engn, Pasadena, CA 91125 USA
基金
美国国家卫生研究院;
关键词
MICROTUBULES; ACETYLATION; PROTEINS; GENETICS; CONTACTS; NEURONS; DOMAIN;
D O I
10.1016/j.jmb.2014.05.009
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
Tubulin protomers undergo an extensive array of post-translational modifications to tailor microtubules to specific tasks. One such modification, the acetylation of lysine 40 of a-tubulin, located in the lumen of microtubules, is associated with stable, long-living microtubule structures. MEC-17 was recently identified as the acetyltransferase that mediates this event. We have determined the crystal structure of the catalytic core of human MEC-17 in complex with its cofactor acetyl-CoA at 1.7 A resolution. The structure reveals that the MEC-17 core adopts a canonical Gcn5-related N-acetyltransferase (GNAT) fold that is decorated with extensive surface loops. An enzymatic analysis of 33 MEC-17 surface mutants identifies hot-spot residues for catalysis and substrate recognition. A large, evolutionarily conserved hydrophobic surface patch that is critical for enzymatic activity is identified, suggesting that specificity is achieved by interactions with the a-tubulin substrate that extend outside of the modified surface loop. An analysis of MEC-17 mutants in Caenorhabditis elegans shows that enzymatic activity is dispensable for touch sensitivity. (C) 2014 Elsevier Ltd. All rights reserved.
引用
收藏
页码:2605 / 2616
页数:12
相关论文
共 41 条
[1]   PHENIX: a comprehensive Python']Python-based system for macromolecular structure solution [J].
Adams, Paul D. ;
Afonine, Pavel V. ;
Bunkoczi, Gabor ;
Chen, Vincent B. ;
Davis, Ian W. ;
Echols, Nathaniel ;
Headd, Jeffrey J. ;
Hung, Li-Wei ;
Kapral, Gary J. ;
Grosse-Kunstleve, Ralf W. ;
McCoy, Airlie J. ;
Moriarty, Nigel W. ;
Oeffner, Robert ;
Read, Randy J. ;
Richardson, David C. ;
Richardson, Jane S. ;
Terwilliger, Thomas C. ;
Zwart, Peter H. .
ACTA CRYSTALLOGRAPHICA SECTION D-STRUCTURAL BIOLOGY, 2010, 66 :213-221
[2]   MEC-17 is an α-tubulin acetyltransferase [J].
Akella, Jyothi S. ;
Wloga, Dorota ;
Kim, Jihyun ;
Starostina, Natalia G. ;
Lyons-Abbott, Sally ;
Morrissette, Naomi S. ;
Dougan, Scott T. ;
Kipreos, Edward T. ;
Gaertig, Jacek .
NATURE, 2010, 467 (7312) :218-U111
[3]   THE CCP4 SUITE - PROGRAMS FOR PROTEIN CRYSTALLOGRAPHY [J].
BAILEY, S .
ACTA CRYSTALLOGRAPHICA SECTION D-BIOLOGICAL CRYSTALLOGRAPHY, 1994, 50 :760-763
[4]   Electrostatics of nanosystems: Application to microtubules and the ribosome [J].
Baker, NA ;
Sept, D ;
Joseph, S ;
Holst, MJ ;
McCammon, JA .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 2001, 98 (18) :10037-10041
[5]   ALSCRIPT - A TOOL TO FORMAT MULTIPLE SEQUENCE ALIGNMENTS [J].
BARTON, GJ .
PROTEIN ENGINEERING, 1993, 6 (01) :37-40
[6]  
BRENNER S, 1974, GENETICS, V77, P71
[7]   Brain plasmamembrane NA+,K+-ATPase is inhibited by acetylated tubulin [J].
Casale, CH ;
Alonso, AD ;
Barra, HS .
MOLECULAR AND CELLULAR BIOCHEMISTRY, 2001, 216 (1-2) :85-92
[8]   DEVELOPMENTAL GENETICS OF THE MECHANOSENSORY NEURONS OF CAENORHABDITIS-ELEGANS [J].
CHALFIE, M ;
SULSTON, J .
DEVELOPMENTAL BIOLOGY, 1981, 82 (02) :358-370
[9]   Posttranslational Acetylation of α-Tubulin Constrains Protofilament Number in Native Microtubules [J].
Cueva, Juan G. ;
Hsin, Jen ;
Huang, Kerwyn Casey ;
Goodman, Miriam B. .
CURRENT BIOLOGY, 2012, 22 (12) :1066-1074
[10]   MolProbity: all-atom contacts and structure validation for proteins and nucleic acids [J].
Davis, Ian W. ;
Leaver-Fay, Andrew ;
Chen, Vincent B. ;
Block, Jeremy N. ;
Kapral, Gary J. ;
Wang, Xueyi ;
Murray, Laura W. ;
Arendall, W. Bryan, III ;
Snoeyink, Jack ;
Richardson, Jane S. ;
Richardson, David C. .
NUCLEIC ACIDS RESEARCH, 2007, 35 :W375-W383