Crystallization and preliminary X-ray crystallographic analysis of carboxyl-terminal region 4 of SigR from Streptomyces coelicolor A3(2)

被引:1
作者
Kim, Keon Young [1 ]
Kim, Sunmin [1 ]
Park, Jeong Kuk [1 ]
Song, HyoJin [1 ]
Park, SangYoun [1 ]
机构
[1] Soongsil Univ, Sch Syst Biomed Sci, Seoul 156743, South Korea
来源
ACTA CRYSTALLOGRAPHICA SECTION F-STRUCTURAL BIOLOGY COMMUNICATIONS | 2014年 / 70卷
基金
新加坡国家研究基金会;
关键词
RNA-POLYMERASE; SIGMA(R); BINDING; STRESS;
D O I
10.1107/S2053230X14008437
中图分类号
Q5 [生物化学];
学科分类号
071010 ; 081704 ;
摘要
Full-length SigR from Streptomyces coelicolor A3(2) was overexpressed in Escherichia coli, purified and submitted to crystallization trials using either polyethylene glycol 3350 or 4000 as a precipitant. X-ray diffraction data were collected to 2.60 angstrom resolution under cryoconditions using synchrotron X-rays. The crystal packs in space group P4(3)2(1)2, with unit-cell parameters a = b = 42.14, c = 102.02 angstrom. According to the Matthews coefficient, the crystal asymmetric unit cannot contain the full-length protein. Molecular replacement with the known structures of region 2 and region 4 as independent search models indicates that the crystal contains only the -35 element-binding carboxyl-terminal region 4 of full-length SigR. Mass-spectrometric analysis of the harvested crystal confirms this, suggesting a crystal volume per protein weight (V-M) of 2.24 angstrom(3) Da(-1) and 45.1% solvent content.
引用
收藏
页码:747 / 749
页数:3
相关论文
共 15 条
  • [1] How sigma docks to RNA polymerase and what sigma does
    Burgess, RR
    Anthony, L
    [J]. CURRENT OPINION IN MICROBIOLOGY, 2001, 4 (02) : 126 - 131
  • [2] POLYPEPTIDES CONTAINING HIGHLY CONSERVED REGIONS OF TRANSCRIPTION INITIATION-FACTOR SIGMA-70 EXHIBIT SPECIFICITY OF BINDING TO PROMOTER DNA
    DOMBROSKI, AJ
    WALTER, WA
    RECORD, MT
    SIEGELE, DA
    GROSS, CA
    [J]. CELL, 1992, 70 (03) : 501 - 512
  • [3] CALCULATION OF PROTEIN EXTINCTION COEFFICIENTS FROM AMINO-ACID SEQUENCE DATA
    GILL, SC
    VONHIPPEL, PH
    [J]. ANALYTICAL BIOCHEMISTRY, 1989, 182 (02) : 319 - 326
  • [4] RsrA, an anti-sigma factor regulated by redox change
    Kang, JG
    Paget, MSB
    Seok, YJ
    Hahn, MY
    Bae, JB
    Hahn, JS
    Kleanthous, C
    Buttner, MJ
    Roe, JH
    [J]. EMBO JOURNAL, 1999, 18 (15) : 4292 - 4298
  • [5] Alternative sigma factors and their roles in bacterial virulence
    Kazmierczak, MJ
    Wiedmann, M
    Boor, KJ
    [J]. MICROBIOLOGY AND MOLECULAR BIOLOGY REVIEWS, 2005, 69 (04) : 527 - +
  • [6] The structural basis for promoter-35 element recognition by the group IV σ factors
    Lane, William J.
    Darst, Seth A.
    [J]. PLOS BIOLOGY, 2006, 4 (09) : 1491 - 1500
  • [7] Identification and structure of the anti-sigma factor-binding domain of the disulphide-stress regulated sigma factor σR from Streptomyces coelicolor
    Li, W
    Stevenson, CEM
    Burton, N
    Jakimowicz, P
    Paget, MSB
    Buttner, MJ
    Lawson, DM
    Kleanthous, C
    [J]. JOURNAL OF MOLECULAR BIOLOGY, 2002, 323 (02) : 225 - 236
  • [8] SOLVENT CONTENT OF PROTEIN CRYSTALS
    MATTHEWS, BW
    [J]. JOURNAL OF MOLECULAR BIOLOGY, 1968, 33 (02) : 491 - +
  • [9] Likelihood-enhanced fast translation functions
    McCoy, AJ
    Grosse-Kunstleve, RW
    Storoni, LC
    Read, RJ
    [J]. ACTA CRYSTALLOGRAPHICA SECTION D-STRUCTURAL BIOLOGY, 2005, 61 : 458 - 464
  • [10] Processing of X-ray diffraction data collected in oscillation mode
    Otwinowski, Z
    Minor, W
    [J]. MACROMOLECULAR CRYSTALLOGRAPHY, PT A, 1997, 276 : 307 - 326