Absorption and fluorescence properties of oligothiophene biomarkers from long-range-corrected time-dependent density functional theory

被引:155
作者
Wong, Bryan M. [1 ]
Piacenza, Manuel [2 ]
Della Sala, Fabio [2 ]
机构
[1] Sandia Natl Labs, Dept Chem Mat, Livermore, CA 94551 USA
[2] Univ Salento, Distretto Tecnol ISUFI, CNR INFM, Natl Nanotechnol Lab, I-73100 Lecce, Italy
基金
美国能源部;
关键词
TRANSFER EXCITED-STATES; N-SUCCINIMIDYL ESTERS; CHARGE-TRANSFER; LOCAL-DENSITY; APPROXIMATION; ENERGIES; SPECTRA; SERIES; DYES;
D O I
10.1039/b901743g
中图分类号
O64 [物理化学(理论化学)、化学物理学];
学科分类号
070304 ; 081704 ;
摘要
The absorption and fluorescence properties in a class of oligothiophene push-pull biomarkers are investigated with a long-range-corrected (LC) density functional method. Using linear-response time-dependent density functional theory (TDDFT), we calculate excitation energies, fluorescence energies, oscillator strengths, and excited-state dipole moments. To benchmark and assess the quality of the LC-TDDFT formalism, an extensive comparison is made between LC-BLYP excitation energies and approximate coupled cluster singles and doubles (CC2) calculations. When using a properly-optimized value of the range parameter, mu, we find that the LC technique provides an accurate description of charge-transfer excitations as a function of biomarker size and chemical functionalization. In contrast, we find that re-optimizing the fraction of Hartree Fock exchange in conventional hybrid functionals still yields an inconsistent description of excitation energies and oscillator strengths for the two lowest excited states in our series of biomarkers. The results of the present study emphasize the importance of a distance-dependent contribution of exchange in TDDFT for investigating excited-state properties.
引用
收藏
页码:4498 / 4508
页数:11
相关论文
共 64 条
[1]  
Adamson RD, 1999, J COMPUT CHEM, V20, P921, DOI 10.1002/(SICI)1096-987X(19990715)20:9<921::AID-JCC3>3.0.CO
[2]  
2-K
[3]  
[Anonymous], DENSITY FUNCTIONAL T
[4]   Bright oligothiophene N-succinimidyl esters for efficient fluorescent labeling of proteins and oligonucleotides [J].
Barbarella, G ;
Zambianchi, M ;
Ventola, A ;
Fabiano, E ;
Della Sala, F ;
Gigli, G ;
Anni, M ;
Bolognesi, A ;
Polito, L ;
Naldi, M ;
Capobianco, M .
BIOCONJUGATE CHEMISTRY, 2006, 17 (01) :58-67
[5]   Density-functional thermochemistry .4. A new dynamical correlation functional and implications for exact-exchange mixing [J].
Becke, AD .
JOURNAL OF CHEMICAL PHYSICS, 1996, 104 (03) :1040-1046
[6]   DENSITY-FUNCTIONAL THERMOCHEMISTRY .3. THE ROLE OF EXACT EXCHANGE [J].
BECKE, AD .
JOURNAL OF CHEMICAL PHYSICS, 1993, 98 (07) :5648-5652
[7]   DENSITY-FUNCTIONAL EXCHANGE-ENERGY APPROXIMATION WITH CORRECT ASYMPTOTIC-BEHAVIOR [J].
BECKE, AD .
PHYSICAL REVIEW A, 1988, 38 (06) :3098-3100
[8]   The adiabatic connection method: A non-empirical hybrid [J].
Burke, K ;
Ernzerhof, M ;
Perdew, JP .
CHEMICAL PHYSICS LETTERS, 1997, 265 (1-2) :115-120
[9]   Density functional theory for charge transfer: The nature of the N-bands of porphyrins and chlorophylls revealed through CAM-B3LYP, CASPT2, and SAC-CI calculations [J].
Cai, Zheng-Li ;
Crossley, Maxwell J. ;
Reimers, Jeffrey R. ;
Kobayashi, Rika ;
Amos, Roger D. .
JOURNAL OF PHYSICAL CHEMISTRY B, 2006, 110 (31) :15624-15632
[10]  
Casida M. E, 1995, RECENT ADV DENSITY F, V1