Pedobacter mongoliensis sp nov., isolated from grassland soil

被引:7
作者
Yuan, Kai [1 ]
Cao, Min [1 ]
Li, Jingxin [1 ]
Wang, Gejiao [1 ]
机构
[1] Huazhong Agr Univ, Coll Life Sci & Technol, State Key Lab Agr Microbiol, Wuhan 430070, Hubei, Peoples R China
关键词
Bacteroidetes; Pedobacter; Pedobacter mongoliensis; taxa; EMENDED DESCRIPTION; GENUS PEDOBACTER; DAECHUNGENSIS; HEPARINUS; BACTERIA; FAMILY; ACID; DNA;
D O I
10.1099/ijsem.0.002637
中图分类号
Q93 [微生物学];
学科分类号
071005 ; 100705 ;
摘要
A Gram-stain-negative, rod-shaped, motile by gliding and strictly aerobic bacterial strain, named 1-32(T),was isolated from soil of the Ordos grassland in Inner Mongolia, PR China. Strain 1-32(T) showed highest 16S rRNA gene sequence similarities to Pedobacter luteus N7d-4(T) (95.4 %), Pedobacter oryzae DSM 19973(T) (95.3 %), ` Pedobacter xinjiangensis' 12157(T) (95.2 %) and Pedobacter tournemirensis TF5- 37.2- LB10(T) (95.1 %). Phylogenetic analyses clustered strain 1-32(T) with ` P. xinjiangensis' 12157(T) and P. tournemirensis TF5- 37.2- LB10(T). The DNA G+ C content was 43.4 mol%. Menaquinone 7 was the main respiratory quinone. The predominant fatty acids (> 5 %) were iso-C-15 : 0, summed feature 3 (C-16 (:) (1)omega 6c and/ or C-16 : 1 omega 7c), iso-C-17 : 0 3-OH, iso-C-15 : 0 3-OH and C-16 : 1 omega 5c. The polar lipids of strain 1-32(T) comprised phosphatidylethanolamine, two unidentified polar lipids, one unidentified glycolipid and two unidentified phospholipids. Strain 1- 32(T) could be distinguished from the other members of the genus Pedobacter based on its phylogenetic distance and physiological and biochemical characteristics such as being negative for the assimilation of rhamnose and the activity of alpha- glucosidase. Therefore, strain 1-32(T) represents a novel species of the genus Pedobacter, for which the name Pedobacter mongoliensis sp. nov. is proposed. The type strain is 1-32(T) (= KCTC 52859(T) = CCTCC AB 2017084(T)).
引用
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页码:1112 / 1117
页数:6
相关论文
共 44 条
[31]   Pedobacter huanghensis sp nov and Pedobacter glacialis sp nov., isolated from Arctic glacier foreland [J].
Qiu, Xia ;
Qu, Zhihao ;
Jiang, Fan ;
Ren, Lvzhi ;
Chang, Xulu ;
Kan, Wenjing ;
Fang, Chengxiang ;
Peng, Fang .
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY, 2014, 64 :2431-2436
[32]   THE NEIGHBOR-JOINING METHOD - A NEW METHOD FOR RECONSTRUCTING PHYLOGENETIC TREES [J].
SAITOU, N ;
NEI, M .
MOLECULAR BIOLOGY AND EVOLUTION, 1987, 4 (04) :406-425
[33]  
Sasser M, 1990, Technical Note 101, DOI DOI 10.1007/S00248-013-0193-4
[34]   Pedobacter himalayensis sp nov., from the Hamta glacier located in the Himalayan mountain ranges of India [J].
Shivaji, S ;
Chaturvedi, P ;
Reddy, GSN ;
Suresh, K .
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY, 2005, 55 :1083-1088
[35]   Classification of heparinolytic bacteria into a new genus, Pedobacter, comprising four species:: Pedobacter heparinus comb, nov., Pedobacter piscium comb. nov., Pedobacter africanus sp. nov. and Pedobacter saltans sp. nov.: Proposal of the family Sphingobacteriaceae fam. nov. [J].
Steyn, PL ;
Segers, P ;
Vancanneyt, M ;
Sandra, P ;
Kersters, K ;
Joubert, JJ .
INTERNATIONAL JOURNAL OF SYSTEMATIC BACTERIOLOGY, 1998, 48 :165-177
[36]  
Tamura K, 2013, MOL BIOL EVOL, V30, P2725, DOI [10.1093/molbev/mst197, 10.1093/molbev/msr121]
[37]   Pedobacter xinjiangensis sp nov., from the Desert, Xinjiang [J].
Tang Yali ;
Wang, Yang ;
Ji, Shanming ;
Zhang, Kundi ;
Dai, Jun ;
Zhang, Lei ;
Peng, Fang ;
Fang, Chengxiang .
JOURNAL OF MICROBIOLOGY AND BIOTECHNOLOGY, 2010, 20 (02) :397-402
[38]  
TARRAND JJ, 1982, J CLIN MICROBIOL, V16, P772, DOI 10.1128/JCM.16.4.772-774.1982
[39]   Pedobacter tournemirensis sp nov., isolated from a fault water sample of a deep Toarcian argillite layer [J].
Urios, Laurent ;
Intertaglia, Laurent ;
Magot, Michel .
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY, 2013, 63 :303-308
[40]   Pedobacter caeni sp nov., a novel species isolated from a nitrifying inoculum [J].
Vanparys, B ;
Heylen, K ;
Lebbe, L ;
De Vos, P .
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY, 2005, 55 :1315-1318