Understanding Host-Pathogen Interactions in Brassica napus in the Omics Era

被引:25
作者
Neik, Ting Xiang [1 ]
Amas, Junrey [2 ,3 ]
Barbetti, Martin [3 ,4 ]
Edwards, David [2 ,3 ]
Batley, Jacqueline [2 ,3 ]
机构
[1] Sunway Coll Kuala Lumpur, Bandar Sunway 47500, Selangor, Malaysia
[2] Univ Western Australia, Sch Biol Sci, Perth, WA 6009, Australia
[3] Univ Western Australia, Inst Agr, Perth, WA 6009, Australia
[4] Univ Western Australia, Sch Agr & Environm, Perth, WA 6009, Australia
来源
PLANTS-BASEL | 2020年 / 9卷 / 10期
基金
澳大利亚研究理事会;
关键词
Brassica napus; host-pathogen interaction; pathosystems; omics; next-generation sequencing (NGS); pangenomics; secretomics; bioinformatics; HEADING CHINESE-CABBAGE; PLASMODIOPHORA-BRASSICAE; LEPTOSPHAERIA-MACULANS; GENOME ARCHITECTURE; PROTEOMIC ANALYSIS; PLANT IMMUNITY; TRANSCRIPTOME ANALYSIS; RNA-SEQ; REVEALS; GENES;
D O I
10.3390/plants9101336
中图分类号
Q94 [植物学];
学科分类号
071001 ;
摘要
Brassica napus (canola/oilseed rape/rapeseed) is an economically important crop, mostly found in temperate and sub-tropical regions, that is cultivated widely for its edible oil. Major diseases of Brassica crops such as Blackleg, Clubroot, Sclerotinia Stem Rot, Downy Mildew, Alternaria Leaf Spot and White Rust have caused significant yield and economic losses in rapeseed-producing countries worldwide, exacerbated by global climate change, and, if not remedied effectively, will threaten global food security. To gain further insights into the host-pathogen interactions in relation to Brassica diseases, it is critical that we review current knowledge in this area and discuss how omics technologies can offer promising results and help to push boundaries in our understanding of the resistance mechanisms. Omics technologies, such as genomics, proteomics, transcriptomics and metabolomics approaches, allow us to understand the host and pathogen, as well as the interaction between the two species at a deeper level. With these integrated data in multi-omics and systems biology, we are able to breed high-quality disease-resistant Brassica crops in a more holistic, targeted and accurate way.
引用
收藏
页码:1 / 31
页数:29
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