Pyrrolysine encoded by UAG in Archaea: Charging of a UAG-decoding specialized tRNA

被引:469
作者
Srinivasan, G [1 ]
James, CM [1 ]
Krzycki, JA [1 ]
机构
[1] Ohio State Univ, Dept Microbiol, Columbus, OH 43210 USA
关键词
D O I
10.1126/science.1069588
中图分类号
O [数理科学和化学]; P [天文学、地球科学]; Q [生物科学]; N [自然科学总论];
学科分类号
07 ; 0710 ; 09 ;
摘要
Pyrrolysine is a lysine derivative encoded by the UAG codon in methylamine methyltransferase genes of Methanosarcina barkeri. Near a methyltransferase gene cluster is the pylT gene, which encodes an unusual transfer RNA (tRNA) with a CUA anticodon. The adjacent pylS gene encodes a class II aminoacyl-tRNA synthetase that charges the pylT-derived tRNA with lysine but is not closely related to known lysyl-tRNA synthetases. Homologs of pylS and pylT are found in a Gram-positive bacterium. Charging a tRNA(CUA) with lysine is a likely first step in translating UAG amber codons as pyrrolysine in certain methanogens. Our results indicate that pyrrolysine is the 22nd genetically encoded natural amino acid.
引用
收藏
页码:1459 / 1462
页数:4
相关论文
共 26 条
[1]   Domain-domain communication in aminoacyl-tRNA synthetases [J].
Alexander, RW ;
Schimmel, P .
PROGRESS IN NUCLEIC ACID RESEARCH AND MOLECULAR BIOLOGY, VOL 69, 2001, 69 :317-349
[2]   Gapped BLAST and PSI-BLAST: a new generation of protein database search programs [J].
Altschul, SF ;
Madden, TL ;
Schaffer, AA ;
Zhang, JH ;
Zhang, Z ;
Miller, W ;
Lipman, DJ .
NUCLEIC ACIDS RESEARCH, 1997, 25 (17) :3389-3402
[3]  
Bateman A, 2004, NUCLEIC ACIDS RES, V32, pD138, DOI [10.1093/nar/gkp985, 10.1093/nar/gkh121, 10.1093/nar/gkr1065]
[4]   Clustered genes encoding the methyltransferases of methanogenesis from monomethylamine [J].
Burke, SA ;
Lo, SL ;
Krzycki, JA .
JOURNAL OF BACTERIOLOGY, 1998, 180 (13) :3432-3440
[5]   Selenocysteine inserting tRNAs:: an overview [J].
Commans, S ;
Böck, A .
FEMS MICROBIOLOGY REVIEWS, 1999, 23 (03) :335-351
[6]   Glutamyl-tRNAGln amidotransferase in Deinococcus radiodurans may be confined to asparagine biosynthesis [J].
Curnow, AW ;
Tumbula, DL ;
Pelaschier, JT ;
Min, B ;
Söll, D .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 1998, 95 (22) :12838-12843
[7]   The crystal structures of T-thermophilus lysyl-tRNA synthetase complexed with E-coli tRNA(Lys) and a T-thermophilus tRNA(Lys) transcript: Anticodon recognition and conformational changes upon binding of a lysyl-adenylate analogue [J].
Cusack, S ;
Yaremchuk, A ;
Tukalo, M .
EMBO JOURNAL, 1996, 15 (22) :6321-6334
[8]   Active site of lysyl-tRNA synthetase: Structural studies of the adenylation reaction [J].
Desogus, G ;
Todone, F ;
Brick, P ;
Onesti, S .
BIOCHEMISTRY, 2000, 39 (29) :8418-8425
[9]   PARTITION OF TRANSFER-RNA SYNTHETASES INTO 2 CLASSES BASED ON MUTUALLY EXCLUSIVE SETS OF SEQUENCE MOTIFS [J].
ERIANI, G ;
DELARUE, M ;
POCH, O ;
GANGLOFF, J ;
MORAS, D .
NATURE, 1990, 347 (6289) :203-206
[10]  
FERGUSON T, UNPUB