Gene signatures of 6-methyladenine regulators in women with lung adenocarcinoma and development of a risk scoring system: a retrospective study using The Cancer Genome Atlas database

被引:9
作者
Gao, Chundi [1 ]
Zhuang, Jing [2 ]
Li, Huayao [3 ]
Liu, Cun [1 ]
Zhou, Chao [2 ]
Liu, Lijuan [2 ]
Feng, Fubin [2 ]
Sun, Changgang [2 ,4 ]
机构
[1] Shandong Univ Tradit Chinese Med, Coll Clin Med 1, Jinan 250014, Shandong, Peoples R China
[2] Weifang Tradit Chinese Hosp, Dept Oncol, Weifang 261041, Shandong, Peoples R China
[3] Shandong Univ Tradit Chinese Med, Coll Basic Med Sci, Jinan 250014, Shandong, Peoples R China
[4] Shandong Univ Tradit Chinese Med, Canc & Immunol Inst, Jinan, Shandong, Peoples R China
来源
AGING-US | 2021年 / 13卷 / 03期
基金
中国国家自然科学基金;
关键词
female lung adenocarcinoma; 6-methyladenine regulators; prognostic risk scoring system; Cox regression analysis; copy number variation; SOMATIC MUTATIONS; DNA METHYLATION; CELL-MIGRATION; RNA; PROTEIN; EPIGENOMICS; PROGRESSION;
D O I
10.18632/aging.202364
中图分类号
Q2 [细胞生物学];
学科分类号
071009 ; 090102 ;
摘要
Although the emergence of new treatments has improved the prognosis of women with lung adenocarcinoma (LUAD), the emergence of drug resistance limits their clinical efficacy. Therefore, there is an urgent need to identify new targets and develop a risk scoring system to evaluate the prognosis of patients. 6-methyladenine (M6A), as the most common methyl modification in RNA modification, its clinicopathological features, diagnosis and prognostic value in lung cancer, especially in LUAD remain to be discussed. We analyzed the clinical and sequencing data of the female LUAD cohort from The Cancer Genome Atlas (TCGA), evaluated the expression profiles of 16 M6A regulation-related genes in the cohort and the relationships between genetic changes and clinical characteristics, developed an M6A-related risk scoring system using Cox analysis. Finally, the copy number variations (CNVs) of the related genes in the samples were analyzed and verified using the cBioPortal platform. Compared with other clinical factors, this risk scoring system showed a higher predictive sensitivity and specificity. The M6A-related risk scoring system developed in this study may help to improve the screening of female patients at high risk of LUAD and provides important theoretical bioinformatics support for evaluating the prognosis of such patients.
引用
收藏
页码:3957 / 3968
页数:12
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