A genome-wide association study identifies genetic loci associated with specific lobar brain volumes

被引:22
|
作者
van Der Lee, Sven J. [1 ]
Knol, Maria J. [1 ]
Chauhan, Ganesh [2 ,3 ]
Satizabal, Claudia L. [4 ,5 ,6 ]
Smith, Albert Vernon [7 ,8 ]
Hofer, Edith [9 ,10 ]
Bis, Joshua C. [11 ]
Hibar, Derrek P. [12 ]
Hilal, Saima [1 ,13 ,14 ,15 ]
van den Akker, Erik B. [16 ,17 ,18 ]
Arfanakis, Konstantinos [19 ,20 ]
Bernard, Manon [21 ]
Yanek, Lisa R. [22 ]
Amin, Najaf [1 ]
Crivello, Fabrice [23 ]
Cheung, Josh W. [12 ]
Harris, Tamara B. [24 ]
Saba, Yasaman [25 ]
Lopez, Oscar L. [26 ]
Li, Shuo [27 ]
van Der Grond, Jeroen [28 ]
Yu, Lei [20 ]
Paus, Tomas [29 ,30 ,31 ]
Roshchupkin, Gennady, V [1 ,15 ,32 ]
Amouyel, Philippe [33 ]
Jahanshad, Neda [12 ]
Taylor, Kent D. [34 ]
Yang, Qiong [27 ]
Mathias, Rasika A. [22 ]
Boehringer, Stefan [18 ]
Mazoyer, Bernard [23 ]
Rice, Ken [35 ]
Cheng, Ching Yu [36 ]
Maillard, Pauline [37 ]
van Heemst, Diana [38 ]
Wong, Tien Yin [36 ]
Niessen, Wiro J. [32 ,39 ]
Beiser, Alexa S. [5 ,6 ,27 ]
Beekman, Marian [16 ]
Zhao, Wanting [36 ]
Nyquist, Paul A. [40 ]
Chen, Christopher [13 ,14 ]
Launer, Lenore J. [24 ]
Psaty, Bruce M. [11 ,41 ,42 ,43 ]
Ikram, M. Kamran [1 ,44 ]
Vernooij, Meike W. [1 ,15 ]
Schmidt, Helena [25 ]
Pausova, Zdenka [21 ,45 ,46 ]
Becker, Diane M. [22 ]
De Jager, Philip L. [47 ,48 ]
机构
[1] Univ Med Ctr, Dept Epidemiol, Erasmus MC, NL-3015 CN Rotterdam, Netherlands
[2] Univ Bordeaux, Bordeaux Populat Hlth Res Ctr, INSERM UMR 1219, F-33000 Bordeaux, France
[3] Indian Inst Sci, Ctr Brain Res, Bangalore 560012, Karnataka, India
[4] UT Hlth San Antonio, Glenn Biggs Inst Alzheimers & Neurodegenerat Dis, San Antonio, TX 78229 USA
[5] Boston Univ, Sch Med, Boston, MA 02118 USA
[6] Framingham Heart Dis Epidemiol Study, Boston, MA 02118 USA
[7] Iceland Heart Assoc, IS-201 Kopavogur, Iceland
[8] Univ Iceland, Fac Med, IS-101 Reykjavik, Iceland
[9] Med Univ Graz, Dept Neurol, Clin Div Neurogeriatr, A-8036 Graz, Austria
[10] Med Univ Graz, Inst Med Informat Stat & Documentat, A-8036 Graz, Austria
[11] Univ Washington, Dept Med, Cardiovasc Hlth Res Unit, Seattle, WA 98101 USA
[12] Univ Southern Calif, Imaging Genet Ctr, Mark & Mary Stevens Neuroimaging & Informat Inst, Keck Sch Med, Los Angeles, CA 90292 USA
[13] Natl Univ Singapore, Dept Pharmacol, Singapore 117600, Singapore
[14] Natl Univ Hlth Syst, Memory Aging & Cognit Ctr, Singapore 119228, Singapore
[15] Univ Med Ctr, Dept Radiol & Nucl Med, Erasmus MC, NL-3015 CN Rotterdam, Netherlands
[16] Leiden Univ, Dept Biomed Data Sci, Sect Mol Epidemiol, Med Ctr, NL-2333 ZA Leiden, Netherlands
[17] Delft Univ Technol, Pattern Recognit & Bioinformat, NL-2628 XE Delft, Netherlands
[18] Leiden Univ, Dept Biomed Data Sci, Stat Genet, Med Ctr, NL-2333 ZA Leiden, Netherlands
[19] IIT, Dept Biomed Engn, Chicago, IL 60616 USA
[20] Rush Univ, Med Ctr, Rush Alzheimers Dis Ctr, Chicago, IL 60612 USA
[21] Univ Toronto, Hosp Sick Children, Toronto, ON M5G 1X8, Canada
[22] Johns Hopkins Sch Med, Dept Med, GeneSTAR Res Program, Baltimore, MD 21205 USA
[23] Bordeaux Univ, Neurofunct Imaging Grp, Neurodegenerat Dis Inst, UMR 5293,Team 5,CEA,CNRS, F-33076 Bordeaux, France
[24] NIA, Lab Epidemiol & Populat Sci, Intramural Res Program, NIH, Bethesda, MD 20892 USA
[25] Med Univ Graz, Res Unit Genet Epidemiol, Gottfried Schatz Res Ctr Cell Signaling Metab & A, A-8010 Graz, Austria
[26] Univ Pittsburgh, Dept Neurol, Pittsburgh, PA 15260 USA
[27] Boston Univ, Sch Publ Hlth, Dept Biostat, Boston, MA 02118 USA
[28] Leiden Univ, Dept Radiol, Med Ctr, NL-2333 ZA Leiden, Netherlands
[29] Holland Bloorview Kids Rehabil Hosp, Bloorview Res Inst, Toronto, ON M4G 1R8, Canada
[30] Univ Toronto, Dept Psychol, Toronto, ON M5S 1A1, Canada
[31] Univ Toronto, Dept Psychiat, Toronto, ON M5S 1A1, Canada
[32] Erasmus MC Univ, Dept Med Informat, Med Ctr, NL-3015 CN Rotterdam, Netherlands
[33] Univ Lille, INSERM, CHU Lille, Inst Pasteur Lille,LabEx DISTALZ,UMR1167,RID AGE, F-59000 Lille, France
[34] Harbor UCLA Med Ctr, Dept Pediat, LABioMed, Inst Translat Genom & Populat Sci, Torrance, CA 90502 USA
[35] Univ Washington, Dept Biostat, Seattle, WA 98195 USA
[36] Singapore Natl Eye Ctr, Singapore Eye Res Inst, Singapore 169857, Singapore
[37] Univ Calif Davis, Imaging Dementia & Aging IDeA Lab, Davis, CA 95817 USA
[38] Leiden Univ, Med Ctr, Dept Gerontol & Geriatr, NL-2333 ZA Leiden, Netherlands
[39] Delft Univ Technol, Fac Appl Sci, NL-2629 HZ Delft, Netherlands
[40] Johns Hopkins Sch Med, Dept Neurol, Baltimore, MD 21205 USA
[41] Univ Washington, Dept Epidemiol, Seattle, WA 98195 USA
[42] Univ Washington, Dept Hlth Serv, Seattle, WA 98195 USA
[43] Kaiser Permanente Washington Hlth Res Inst, Seattle, WA 98101 USA
[44] Univ Med Ctr, Dept Neurol, Erasmus MC, NL-3015 CN Rotterdam, Netherlands
[45] Univ Toronto, Hosp Sick Children, Dept Physiol, Toronto, ON M5G 1X8, Canada
[46] Univ Toronto, Hosp Sick Children, Dept Nutr Sci, Toronto, ON M5G 1X8, Canada
[47] Columbia Univ, Ctr Translat & Computat Neuroimmunol, Med Ctr, New York, NY 10032 USA
[48] Broad Inst, Program Med & Populat Genet, Cambridge, MA 02142 USA
[49] Univ Washington, Dept Neurol, Seattle, WA 98195 USA
[50] Univ Hosp Bordeaux, Dept Neurol, F-33000 Bordeaux, France
关键词
METAANALYSIS; HERITABILITY; CORTEX; RISK; MORPHOLOGY; REGIONS; DISEASE; DAAM1;
D O I
10.1038/s42003-019-0537-9
中图分类号
Q [生物科学];
学科分类号
07 ; 0710 ; 09 ;
摘要
Brain lobar volumes are heritable but genetic studies are limited. We performed genome-wide association studies of frontal, occipital, parietal and temporal lobe volumes in 16,016 individuals, and replicated our findings in 8,789 individuals. We identified six genetic loci associated with specific lobar volumes independent of intracranial volume. Two loci, associated with occipital (6q22.32) and temporal lobe volume (12q14.3), were previously reported to associate with intracranial and hippocampal volume, respectively. We identified four loci previously unknown to affect brain volumes: 3q24 for parietal lobe volume, and 1q22, 4p16.3 and 14q23.1 for occipital lobe volume. The associated variants were located in regions enriched for histone modifications (DAAM1 and THBS3), or close to genes causing Mendelian brain-related diseases (ZIC4 and FGFRL1). No genetic overlap between lobar volumes and neurological or psychiatric diseases was observed. Our findings reveal part of the complex genetics underlying brain development and suggest a role for regulatory regions in determining brain volumes.
引用
收藏
页数:9
相关论文
共 50 条
  • [1] Genome-wide association study identifies 30 loci associated with bipolar disorder
    Stahl, Eli A.
    Breen, Gerome
    Forstner, Andreas J.
    McQuillin, Andrew
    Ripke, Stephan
    Trubetskoy, Vassily
    Mattheisen, Manuel
    Wang, Yunpeng
    Coleman, Jonathan R. I.
    Gaspar, Helena A.
    de Leeuw, Christiaan A.
    Steinberg, Stacy
    Pavlides, Jennifer M. Whitehead
    Trzaskowski, Maciej
    Byrne, Enda M.
    Pers, Tune H.
    Holmans, Peter A.
    Richards, Alexander L.
    Abbott, Liam
    Agerbo, Esben
    Akil, Huda
    Albani, Diego
    Alliey-Rodriguez, Ney
    Als, Thomas D.
    Anjorin, Adebayo
    Antilla, Verneri
    Awasthi, Swapnil
    Badner, Judith A.
    Baekvad-Hansen, Marie
    Barchas, Jack D.
    Bass, Nicholas
    Bauer, Michael
    Belliveau, Richard
    Bergen, Sarah E.
    Pedersen, Carsten Bocker
    Boen, Erlend
    Boks, Marco P.
    Boocock, James
    Budde, Monika
    Bunney, William
    Burmeister, Margit
    Bybjerg-Grauholm, Jonas
    Byerley, William
    Casas, Miquel
    Cerrato, Felecia
    Cervantes, Pablo
    Chambert, Kimberly
    Charney, Alexander W.
    Chen, Danfeng
    Churchhouse, Claire
    NATURE GENETICS, 2019, 51 (05) : 793 - +
  • [2] Genome-wide association study identifies eight loci associated with blood pressure
    Newton-Cheh, Christopher
    Johnson, Toby
    Gateva, Vesela
    Tobin, Martin D.
    Bochud, Murielle
    Coin, Lachlan
    Najjar, Samer S.
    Zhao, Jing Hua
    Heath, Simon C.
    Eyheramendy, Susana
    Papadakis, Konstantinos
    Voight, Benjamin F.
    Scott, Laura J.
    Zhang, Feng
    Farrall, Martin
    Tanaka, Toshiko
    Wallace, Chris
    Chambers, John C.
    Khaw, Kay-Tee
    Nilsson, Peter
    van der Harst, Pim
    Polidoro, Silvia
    Grobbee, Diederick E.
    Onland-Moret, N. Charlotte
    Bots, Michiel L.
    Wain, Louise V.
    Elliott, Katherine S.
    Teumer, Alexander
    Luan, Jian'an
    Lucas, Gavin
    Kuusisto, Johanna
    Burton, Paul R.
    Hadley, David
    McArdle, Wendy L.
    Brown, Morris
    Dominiczak, Anna
    Newhouse, Stephen J.
    Samani, Nilesh J.
    Webster, John
    Zeggini, Eleftheria
    Beckmann, Jacques S.
    Bergmann, Sven
    Lim, Noha
    Song, Kijoung
    Vollenweider, Peter
    Waeber, Gerard
    Waterworth, Dawn M.
    Yuan, Xin
    Groop, Leif
    Orho-Melander, Marju
    NATURE GENETICS, 2009, 41 (06) : 666 - 676
  • [3] Genome-wide association study of body fat distribution identifies adiposity loci and sex-specific genetic effects
    Rask-Andersen, Mathias
    Karlsson, Torgny
    Ek, Weronica E.
    Johansson, Asa
    NATURE COMMUNICATIONS, 2019, 10 (1)
  • [4] A genome-wide association study identifies 41 loci associated with eicosanoid levels
    Rhee, Eugene P.
    Surapaneni, Aditya L.
    Schlosser, Pascal
    Alotaibi, Mona
    Yang, Yueh-ning
    Coresh, Josef
    Jain, Mohit
    Cheng, Susan
    Yu, Bing
    Grams, Morgan E.
    COMMUNICATIONS BIOLOGY, 2023, 6 (01)
  • [5] Genome-wide association study identifies 74 loci associated with educational attainment
    Okbay, Aysu
    Beauchamp, Jonathan P.
    Fontana, Mark Alan
    Lee, James J.
    Pers, Tune H.
    Rietveld, Cornelius A.
    Turley, Patrick
    Chen, Guo-Bo
    Emilsson, Valur
    Meddens, S. Fleur W.
    Oskarsson, Sven
    Pickrell, Joseph K.
    Thom, Kevin
    Timshel, Pascal
    de Vlaming, Ronald
    Abdellaoui, Abdel
    Ahluwalia, Tarunveer S.
    Bacelis, Jonas
    Baumbach, Clemens
    Bjornsdottir, Gyda
    Brandsma, Johannes H.
    Concas, Maria Pina
    Derringer, Jaime
    Furlotte, Nicholas A.
    Galesloot, Tessel E.
    Girotto, Giorgia
    Gupta, Richa
    Hall, Leanne M.
    Harris, Sarah E.
    Hofer, Edith
    Horikoshi, Momoko
    Huffman, Jennifer E.
    Kaasik, Kadri
    Kalafati, Ioanna P.
    Karlsson, Robert
    Kong, Augustine
    Lahti, Jari
    van der Lee, Sven J.
    de Leeuw, Christiaan
    Lind, Penelope A.
    Lindgren, Karl-Oskar
    Liu, Tian
    Mangino, Massimo
    Marten, Jonathan
    Mihailov, Evelin
    Miller, Michael B.
    van der Most, Peter J.
    Oldmeadow, Christopher
    Payton, Antony
    Pervjakova, Natalia
    NATURE, 2016, 533 (7604) : 539 - +
  • [6] Genome-wide association study identifies multiple susceptibility loci for glioma
    Kinnersley, Ben
    Labussiere, Marianne
    Holroyd, Amy
    Di Stefano, Anna-Luisa
    Broderick, Peter
    Vijayakrishnan, Jayaram
    Mokhtari, Karima
    Delattre, Jean-Yves
    Gousias, Konstantinos
    Schramm, Johannes
    Schoemaker, Minouk J.
    Fleming, Sarah J.
    Herms, Stefan
    Heilmann, Stefanie
    Schreiber, Stefan
    Wichmann, Heinz-Erich
    Noethen, Markus M.
    Swerdlow, Anthony
    Lathrop, Mark
    Simon, Matthias
    Bondy, Melissa
    Sanson, Marc
    Houlston, Richard S.
    NATURE COMMUNICATIONS, 2015, 6
  • [7] Genome-wide association study identifies 143 loci associated with 25 hydroxyvitamin D concentration
    Revez, Joana A.
    Lin, Tian
    Qiao, Zhen
    Xue, Angli
    Holtz, Yan
    Zhu, Zhihong
    Zeng, Jian
    Wang, Huanwei
    Sidorenko, Julia
    Kemper, Kathryn E.
    Vinkhuyzen, Anna A. E.
    Frater, Julanne
    Eyles, Darryl
    Burne, Thomas H. J.
    Mitchell, Brittany
    Martin, Nicholas G.
    Zhu, Gu
    Visscher, Peter M.
    Yang, Jian
    Wray, Naomi R.
    McGrath, John J.
    NATURE COMMUNICATIONS, 2020, 11 (01)
  • [8] An extended genome-wide association study identifies novel susceptibility loci for nasopharyngeal carcinoma
    Cui, Qian
    Feng, Qi-Sheng
    Mo, Hao-Yuan
    Sun, Jian
    Xia, Yun-Fei
    Zhang, Hongxing
    Foo, Jia Nee
    Guo, Yun-Miao
    Chen, Li-Zhen
    Li, Ming
    Liu, Wen-Sheng
    Xu, Miao
    Zhou, Gangqiao
    He, Fuchu
    Yu, Xueqing
    Jia, Wei-Hua
    Liu, Jianjun
    Zeng, Yi-Xin
    Bei, Jin-Xin
    HUMAN MOLECULAR GENETICS, 2016, 25 (16) : 3626 - 3634
  • [9] Integrative analysis of genome-wide association studies identifies novel loci associated with neuropsychiatric disorders
    Yao, Xueming
    Glessner, Joseph T.
    Li, Junyi
    Qi, Xiaohui
    Hou, Xiaoyuan
    Zhu, Chonggui
    Li, Xiaoge
    March, Michael E.
    Yang, Liu
    Mentch, Frank D.
    Hain, Heather S.
    Meng, Xinyi
    Xia, Qianghua
    Hakonarson, Hakon
    Li, Jin
    TRANSLATIONAL PSYCHIATRY, 2021, 11 (01)
  • [10] Genome-wide association study identifies genetic risk loci for adiposity in a Taiwanese population
    Wong, Henry Sung-Ching
    Tsai, Szu-Yi
    Chu, Hou-Wei
    Lin, Min-Rou
    Lin, Gan-Hong
    Tai, Yu-Ting
    Shen, Chen-Yang
    Chang, Wei-Chiao
    PLOS GENETICS, 2022, 18 (01):