The complete mitochondrial genome sequence of Osteobrama belangeri (Cyprinidae) and its comparison with other related Cypriniformes fish species

被引:4
作者
Behera, Bijay Kumar [1 ]
Rout, Ajaya Kumar [1 ]
Baisvar, Vishwamitra Singh [1 ]
Paria, Prasenjit [1 ]
Singh, Nandeibam Samarjit [1 ]
Ghadei, Sanjeev Sen [1 ]
Jana, Asim Kumar [1 ]
Parida, Pranaya Kumar [1 ]
Das, Basanta Kumar [1 ]
机构
[1] ICAR Cent Inland Fisheries Res Inst, Biotechnol Lab, Kolkata 700120, W Bengal, India
来源
MITOCHONDRIAL DNA PART B-RESOURCES | 2019年 / 4卷 / 02期
关键词
Next-generation sequencing; mitogenome; O; belangeri; phylogenetic tree;
D O I
10.1080/23802359.2019.1624206
中图分类号
Q3 [遗传学];
学科分类号
071007 ; 090102 ;
摘要
The complete mitogenome of Osteobrama belangeri is described using Ion Torrent (PGM sequencer), which was 16,609 bp in size comprising 13 mRNAs, teo rRNA genes, 22 tRNAs, and 926 bp as D-Loop control region, in addition to gene order and organization, being similar to most of the other related Cypriniformes fish mitogenome of NCBI databases. The all 22 tRNAs were packed into a typical clover-leaf structure. In the present study, the mitogenome has 99% similarity to the complete mitogenome sequence of O. belangeri mitogenome details previously and also would be helpful in understanding the phylogenetics, population genetics, and evolution of family Cyprinidae fishes.
引用
收藏
页码:2330 / 2331
页数:2
相关论文
共 7 条
[1]   Complete mitochondrial genome of near threatened fish species Osteobrama belangeri (Cypriniformes: Cyprinidae) [J].
Barman, Anindya Sundar ;
Singh, Mamta ;
Pandey, Pramod Kumar .
MITOCHONDRIAL DNA PART B-RESOURCES, 2017, 2 (01) :300-301
[2]  
Behera B. K, 2009, ECOLOGY AQUATIC BIOR, P29
[3]   The complete mitochondrial genome of the Anabas testudineus (Perciformes, Anabantidae) and its comparison with other related fish species [J].
Behera, Bijay Kumar ;
Baisvar, Vishwamitra Singh ;
Kumari, Kavita ;
Rout, Ajaya Kumar ;
Pakrashi, Sudip ;
Paria, Prasenjet ;
Rao, A. R. ;
Rai, Anil .
MITOCHONDRIAL DNA PART A, 2017, 28 (1-2) :161-162
[4]   Complete mitochondrial genome sequence of Indian medium carp, Labeo gonius (Hamilton, 1822) and its comparison with other related carp species [J].
Behera, Bijay Kumar ;
Kurnari, Kavita ;
Baisvar, Vishwamitra Singh ;
Rout, Ajaya Kumar ;
Pakrashi, Sudip ;
Paria, Prasenjet ;
Jena, J. K. .
MITOCHONDRIAL DNA PART A, 2017, 28 (1-2) :7-8
[5]  
RZHETSKY A, 1992, MOL BIOL EVOL, V9, P945
[6]   MEGA5: Molecular Evolutionary Genetics Analysis Using Maximum Likelihood, Evolutionary Distance, and Maximum Parsimony Methods [J].
Tamura, Koichiro ;
Peterson, Daniel ;
Peterson, Nicholas ;
Stecher, Glen ;
Nei, Masatoshi ;
Kumar, Sudhir .
MOLECULAR BIOLOGY AND EVOLUTION, 2011, 28 (10) :2731-2739
[7]  
Vishwanath W, 2010, IUCN RED LIST THREAT, DOI [10.2305/IUCN.UK.2010-4.RLTS.T168218A6467894.en, DOI 10.2305/IUCN.UK.2010-4.RLTS.T168218A6467894.EN]