Sphingomonas qilianensis sp nov., Isolated from Surface Soil in the Permafrost Region of Qilian Mountains, China

被引:14
作者
Piao, Ai-Lian [1 ]
Feng, Xiao-Min [1 ]
Nogi, Yuichi [2 ]
Han, Lu [1 ]
Li, Yonghong [3 ]
Lv, Jie [1 ]
机构
[1] Beijing Univ Chem Technol, Coll Life Sci & Technol, Beijing 100029, Peoples R China
[2] Japan Agcy Marine Earth Sci & Technol JAMSTEC, Res & Dev Ctr Marine Biosci, 2-15 Natsushima Cho, Yokosuka, Kanagawa 2370061, Japan
[3] Qinghai 105 Coal Geol Explorat Team, Xining 810007, Qinghai, Peoples R China
关键词
EMENDED DESCRIPTION; GENUS SPHINGOMONAS; BACTERIUM; NOVOSPHINGOBIUM; IDENTIFICATION; SPHINGOPYXIS; SPHINGOBIUM; EXTRACTION; ALIGNMENT; GENERA;
D O I
10.1007/s00284-015-0957-9
中图分类号
Q93 [微生物学];
学科分类号
071005 ; 100705 ;
摘要
A Gram-stain-negative, strictly aerobic, non-motile and rod-shaped bacterial strain, designated X1(T), was isolated from the permafrost region of Qilian Mountains in northwest of China. Phylogenetic analyses of 16S rRNA gene sequence revealed that strain X1(T) was a member of the genus Sphingomonas and shared the highest 16S rRNA gene sequence similarity with Sphingomonas oligophenolica JCM 12082(T) (96.9 %), followed by Sphingomonas glacialis CGMCC 1.8957(T) (96.7 %) and Sphingomonas alpina DSM 22537(T) (96.4 %). Strain X1(T) was able to grow at 15-30 A degrees C, pH 6.0-10.0 and with 0-0.3 % NaCl (w/v). The DNA G+C content of the isolate was 64.8 mol%. Strain X1(T)-contained Q-10 as the dominant ubiquinone and C-18:1 omega 7c, C-16:1 omega 7c, C-16:0 and C-14:0 2-OH as the dominant fatty acids. The polar lipid profile of strain XIT-contained sphingoglycolipid, phosphatidylglycerol, phosphatidylethanolamine, one unidentified glycolipid and two unidentified phospholipid. Due to the phenotypic and genetic distinctiveness and other characteristic studied in this article, we consider X1(T) as a novel species of the genus Sphingomonas and propose to name it Sphingomonas qilianensis sp. nov. The type strain is X1(T) (=CGMCC 1.15349(T) = KCTC 42862(T)).
引用
收藏
页码:363 / 369
页数:7
相关论文
共 35 条
[1]   BASIC LOCAL ALIGNMENT SEARCH TOOL [J].
ALTSCHUL, SF ;
GISH, W ;
MILLER, W ;
MYERS, EW ;
LIPMAN, DJ .
JOURNAL OF MOLECULAR BIOLOGY, 1990, 215 (03) :403-410
[2]  
Barrow GI., 1993, COWAN STEELS MANUAL, V3th
[3]  
Bernardet JF, 2002, INT J SYST EVOL MICR, V52, P1049, DOI [10.1099/ijs.0.02136-0, 10.1099/00207713-52-3-1049]
[4]   Sphingomonas aurantiaca sp nov., Sphingomonas aerolata sp nov and Sphingomonas faeni sp nov., air- and dustborne and Antarctic, orange-pigmented, psychrotolerant bacteria, and emended description of the genus Sphingomonas [J].
Busse, HJ ;
Denner, EBM ;
Buczolits, S ;
Salkinoja-Salonen, M ;
Bennasar, A ;
Kämpfer, P .
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY, 2003, 53 :1253-1260
[5]  
BUSSE J, 1988, SYST APPL MICROBIOL, V11, P1
[6]   The Identification of Polar Lipids in Prokaryotes [J].
da Costa, Milton S. ;
Albuquerque, Luciana ;
Nobre, M. Fernanda ;
Wait, Robin .
METHODS IN MICROBIOLOGY, VOL 38: TAXONOMY OF PROKARYOTES, 2011, 38 :165-181
[7]   The Extraction and Identification of Respiratory Lipoquinones of Prokaryotes and Their Use in Taxonomy [J].
da Costa, Milton S. ;
Albuquerque, Luciana ;
Nobre, M. Fernanda ;
Wait, Robin .
METHODS IN MICROBIOLOGY, VOL 38: TAXONOMY OF PROKARYOTES, 2011, 38 :197-206
[8]  
FELSENSTEIN J, 1985, EVOLUTION, V39, P783, DOI 10.1111/j.1558-5646.1985.tb00420.x
[9]   TOWARD DEFINING COURSE OF EVOLUTION - MINIMUM CHANGE FOR A SPECIFIC TREE TOPOLOGY [J].
FITCH, WM .
SYSTEMATIC ZOOLOGY, 1971, 20 (04) :406-&
[10]  
Hall T.A., 1999, IOC world bird list (version 11.1), DOI [10.1021/bk-1999-0734.ch008, DOI 10.14344/IOC.ML.11.1, DOI 10.1021/BK-1999-0734.CH008]