Preferential hydration and the exclusion of cosolvents from protein surfaces

被引:123
作者
Shimizu, S [1 ]
Smith, DJ [1 ]
机构
[1] Univ York, Dept Chem, York Struct Biol Lab, York YO10 5YW, N Yorkshire, England
关键词
D O I
10.1063/1.1759615
中图分类号
O64 [物理化学(理论化学)、化学物理学];
学科分类号
070304 ; 081704 ;
摘要
Protein stability is enhanced by the addition of osmolytes, such as sugars and polyols and inert crowders, such as polyethylene glycols. This stability enhancement has been quantified by the preferential hydration parameter which can be determined by experiments. To understand the mechanism of protein stability enhancement, we present a statistical mechanical analysis of the preferential hydration parameter based upon Kirkwood-Buff theory. Previously, the preferential hydration parameter was interpreted in terms of the number of hydration waters, as well as the cosolvent exclusion volume. It was not clear how accurate these interpretations were, nor what the relationship is between the two. By using the Kirkwood-Buff theory and experimental data, we conclude that the contribution from the cosolvent exclusion dominantly determines the preferential hydration parameters for crowders. For osmolytes, although the cosolvent exclusion largely determines the preferential hydration parameters, the contribution from hydration may not be negligible. (C) 2004 American Institute of Physics.
引用
收藏
页码:1148 / 1154
页数:7
相关论文
共 55 条
[1]   STABILIZATION OF PROTEIN-STRUCTURE BY SUGARS [J].
ARAKAWA, T ;
TIMASHEFF, SN .
BIOCHEMISTRY, 1982, 21 (25) :6536-6544
[2]   MECHANISM OF POLY(ETHYLENE GLYCOL) INTERACTION WITH PROTEINS [J].
ARAKAWA, T ;
TIMASHEFF, SN .
BIOCHEMISTRY, 1985, 24 (24) :6756-6762
[3]  
Ben-Naim A., 1992, STAT THERMODYNAMICS, P372
[4]   STERIC EXCLUSION IS THE PRINCIPAL SOURCE OF THE PREFERENTIAL HYDRATION OF PROTEINS IN THE PRESENCE OF POLYETHYLENE GLYCOLS [J].
BHAT, R ;
TIMASHEFF, SN .
PROTEIN SCIENCE, 1992, 1 (09) :1133-1143
[5]   The osmophobic effect: Natural selection of a thermodynamic force in protein folding [J].
Bolen, DW ;
Baskakov, IV .
JOURNAL OF MOLECULAR BIOLOGY, 2001, 310 (05) :955-963
[6]   CHARMM - A PROGRAM FOR MACROMOLECULAR ENERGY, MINIMIZATION, AND DYNAMICS CALCULATIONS [J].
BROOKS, BR ;
BRUCCOLERI, RE ;
OLAFSON, BD ;
STATES, DJ ;
SWAMINATHAN, S ;
KARPLUS, M .
JOURNAL OF COMPUTATIONAL CHEMISTRY, 1983, 4 (02) :187-217
[7]   THERMODYNAMIC ANALYSIS OF MULTICOMPONENT SOLUTIONS [J].
CASASSA, EF ;
EISENBERG, H .
ADVANCES IN PROTEIN CHEMISTRY, 1964, 19 :287-395
[8]   Structural thermodynamics of hydration [J].
Chalikian, TV .
JOURNAL OF PHYSICAL CHEMISTRY B, 2001, 105 (50) :12566-12578
[9]   Volumetric properties of proteins [J].
Chalikian, TV .
ANNUAL REVIEW OF BIOPHYSICS AND BIOMOLECULAR STRUCTURE, 2003, 32 :207-235
[10]   The hydration of globular proteins as derived from volume and compressibility measurements: Cross correlating thermodynamic and structural data [J].
Chalikian, TV ;
Totrov, M ;
Abagyan, R ;
Breslauer, KJ .
JOURNAL OF MOLECULAR BIOLOGY, 1996, 260 (04) :588-603