Outer-membrane lipoprotein LpoB spans the periplasm to stimulate the peptidoglycan synthase PBP1B

被引:79
作者
Egan, Alexander J. F. [1 ]
Jean, Nicolas L. [3 ,4 ,5 ]
Koumoutsi, Alexandra [6 ]
Bougault, Catherine M. [3 ,4 ,5 ]
Biboy, Jacob [1 ]
Sassine, Jad [1 ]
Solovyova, Alexandra S. [2 ]
Breukink, Eefjan [7 ]
Typas, Athanasios [6 ]
Vollmer, Waldemar [1 ]
Simorre, Jean-Pierre [3 ,4 ,5 ]
机构
[1] Newcastle Univ, Ctr Bacterial Cell Biol, Newcastle Upon Tyne NE2 4AX, Tyne & Wear, England
[2] Newcastle Univ, Inst Cell & Mol Biosci, Newcastle Upon Tyne NE2 4AX, Tyne & Wear, England
[3] Univ Grenoble Alpes, Inst Biol Struct, F-38027 Grenoble, France
[4] CEA, Direct Sci Vivant, Inst Biol Struct, F-38027 Grenoble, France
[5] CNRS, Inst Biol Struct, F-38027 Grenoble, France
[6] European Mol Biol Lab, Genome Biol Unit, D-69117 Heidelberg, Germany
[7] Univ Utrecht, Bijvoet Ctr Biomol Res, Dept Biochem Membranes, NL-3584 CH Utrecht, Netherlands
基金
英国生物技术与生命科学研究理事会;
关键词
DIVISION PROTEIN FTSN; ESCHERICHIA-COLI; WEB SERVER; TOLB;
D O I
10.1073/pnas.1400376111
中图分类号
O [数理科学和化学]; P [天文学、地球科学]; Q [生物科学]; N [自然科学总论];
学科分类号
07 ; 0710 ; 09 ;
摘要
Bacteria surround their cytoplasmic membrane with an essential, stress-bearing peptidoglycan (PG) layer. Growing and dividing cells expand their PG layer by using membrane-anchored PG synthases, which are guided by dynamic cytoskeletal elements. In Escherichia coli, growth of the mainly single-layered PG is also regulated by outer membrane-anchored lipoproteins. The lipoprotein LpoB is required for the activation of penicillin-binding protein (PBP) 1B, which is a major, bifunctional PG synthase with glycan chain polymerizing (glycosyltransferase) and peptide cross-linking (transpeptidase) activities. Here, we report the structure of LpoB, determined by NMR spectroscopy, showing an N-terminal, 54-aa-long flexible stretch followed by a globular domain with similarity to the N-terminal domain of the prevalent periplasmic protein TolB. We have identified the interaction interface between the globular domain of LpoB and the noncatalytic UvrB domain 2 homolog domain of PBP1B and modeled the complex. Amino acid exchanges within this interface weaken the PBP1B-LpoB interaction, decrease the PBP1B stimulation in vitro, and impair its function in vivo. On the contrary, the N-terminal flexible stretch of LpoB is required to stimulate PBP1B in vivo, but is dispensable in vitro. This supports a model in which LpoB spans the periplasm to interact with PBP1B and stimulate PG synthesis.
引用
收藏
页码:8197 / 8202
页数:6
相关论文
共 32 条
[1]   Structure of the Escherichia coli TolB protein determined by MAD methods at 1.95 Å resolution [J].
Abergel, C ;
Bouveret, E ;
Claverie, JM ;
Brown, K ;
Rigal, A ;
Lazdunski, C ;
Bénédetti, H .
STRUCTURE, 1999, 7 (10) :1291-1300
[2]   Cooperativity of peptidoglycan synthases active in bacterial cell elongation [J].
Banzhaf, Manuel ;
van Saparoea, Bart van den Berg ;
Terrak, Mohammed ;
Fraipont, Claudine ;
Egan, Alexander ;
Philippe, Jules ;
Zapun, Andre ;
Breukink, Eefjan ;
Martine Nguyen-Disteche ;
den Blaauwen, Tanneke ;
Vollmer, Waldemar .
MOLECULAR MICROBIOLOGY, 2012, 85 (01) :179-194
[3]   In vitro murein (peptidoglycan) synthesis by dimers of the bifunctional transglycosylase-transpeptidase PBP1B from Escherichia coli [J].
Bertsche, U ;
Breukink, E ;
Kast, T ;
Vollmer, W .
JOURNAL OF BIOLOGICAL CHEMISTRY, 2005, 280 (45) :38096-38101
[4]   Interaction between two murein (peptidoglycan) synthases, PBP3 and PBP1B, in Escherichia coli [J].
Bertsche, Ute ;
Kast, Thomas ;
Wolf, Benoit ;
Fraipont, Claudine ;
Aarsman, Mirjam E. G. ;
Kannenberg, Kai ;
von Rechenberg, Moritz ;
Nguyen-Disteche, Martine ;
den Blaauwen, Tanneke ;
Hoeltje, Joachim-Volker ;
Vollmer, Waldemar .
MOLECULAR MICROBIOLOGY, 2006, 61 (03) :675-690
[5]   Allosteric β-propeller signalling in TolB and its manipulation by translocating colicins [J].
Bonsor, Daniel A. ;
Hecht, Oliver ;
Vankemmelbeke, Mireille ;
Sharma, Amit ;
Krachler, Anne Marie ;
Housden, Nicholas G. ;
Lilly, Katie J. ;
James, Richard ;
Moore, Geoffrey R. ;
Kleanthous, Colin .
EMBO JOURNAL, 2009, 28 (18) :2846-2857
[6]   Structure of Neisseria meningitidis lipoprotein GNA1162 [J].
Cai, Xiangyu ;
Lu, Jing ;
Wu, Zhenhua ;
Yang, Chunting ;
Xu, Honglin ;
Lin, Zhijie ;
Shen, Yuequan .
ACTA CRYSTALLOGRAPHICA SECTION F-STRUCTURAL BIOLOGY COMMUNICATIONS, 2013, 69 :362-368
[7]   Determination of Secondary Structure Populations in Disordered States of Proteins Using Nuclear Magnetic Resonance Chemical Shifts [J].
Camilloni, Carlo ;
De Simone, Alfonso ;
Vranken, Wim F. ;
Vendruscolo, Michele .
BIOCHEMISTRY, 2012, 51 (11) :2224-2231
[8]   The HADDOCK web server for data-driven biomolecular docking [J].
De Vries, Sjoerd J. ;
van Dijk, Marc ;
Bonvin, Alexandre M. J. J. .
NATURE PROTOCOLS, 2010, 5 (05) :883-897
[9]   The permeability of the wall fabric of Escherichia coli and Bacillus subtilis [J].
Demchick, P ;
Koch, AL .
JOURNAL OF BACTERIOLOGY, 1996, 178 (03) :768-773
[10]   IUPred:: web server for the prediction of intrinsically unstructured regions of proteins based on estimated energy content [J].
Dosztányi, Z ;
Csizmok, V ;
Tompa, P ;
Simon, I .
BIOINFORMATICS, 2005, 21 (16) :3433-3434