A comparison of new methods for generating energy-minimizing configurations of patchy particles

被引:22
作者
Jankowski, Eric [1 ]
Glotzer, Sharon C. [1 ,2 ]
机构
[1] Univ Michigan, Dept Chem Engn, Ann Arbor, MI 48109 USA
[2] Univ Michigan, Dept Mat Sci & Engn, Ann Arbor, MI 48109 USA
关键词
Compendex;
D O I
10.1063/1.3223834
中图分类号
O64 [物理化学(理论化学)、化学物理学];
学科分类号
070304 ; 081704 ;
摘要
Increasingly complex particles are pushing the limits of traditional simulation techniques used to study self-assembly. In this work, we test the use of a learning-augmented Monte Carlo method for predicting low energy configurations of patchy particles shaped like "Tetris (R)" pieces. We extend this method to compare it against Monte Carlo simulations with cluster moves and introduce a new algorithm-bottom-up building block assembly-for quickly generating ordered configurations of particles with a hierarchy of interaction energies. (C) 2009 American Institute of Physics. [doi:10.1063/1.3223834]
引用
收藏
页数:8
相关论文
共 18 条
[1]  
Allen M. P., 1987, COMPUTER SIMULATION
[2]  
Borgs Christian., 2001, Proceedings of the 2001 ACM Symposium on the Theory of Computing, P330
[3]   Improving the efficiency of the aggregation-volume-bias Monte Carlo algorithm [J].
Chen, B ;
Siepmann, JI .
JOURNAL OF PHYSICAL CHEMISTRY B, 2001, 105 (45) :11275-11282
[4]  
DOMB C, 1976, J PHYS A, V9, P10
[5]  
Frenkel D., 2002, UNDERSTANDING MOL SI, V2nd edn
[6]   Anisotropy of building blocks and their assembly into complex structures [J].
Glotzer, Sharon C. ;
Solomon, Michael J. .
NATURE MATERIALS, 2007, 6 (08) :557-562
[7]  
JANKOWSKI E, UNPUB
[8]   Generalized geometric cluster algorithm for fluid simulation [J].
Liu, JW ;
Luijten, E .
PHYSICAL REVIEW E, 2005, 71 (06)
[9]   Rejection-free geometric cluster algorithm for complex fluids [J].
Liu, JW ;
Luijten, E .
PHYSICAL REVIEW LETTERS, 2004, 92 (03) :4
[10]   Strict detailed balance is unnecessary in Monte Carlo simulation [J].
Manousiouthakis, VI ;
Deem, MW .
JOURNAL OF CHEMICAL PHYSICS, 1999, 110 (06) :2753-2756