Database resources of the National Center for Biotechnology Information

被引:424
作者
Sayers, Eric W. [1 ]
Beck, Jeffrey [1 ]
Bolton, Evan E. [1 ]
Bourexis, Devon [1 ]
Brister, James R. [1 ]
Canese, Kathi [1 ]
Comeau, Donald C. [1 ]
Funk, Kathryn [1 ]
Kim, Sunghwan [1 ]
Klimke, William [1 ]
Marchler-Bauer, Aron [1 ]
Landrum, Melissa [1 ]
Lathrop, Stacy [1 ]
Yu, Zhiyong [1 ]
Madden, Thomas L. [1 ]
O'Leary, Nuala [1 ]
Phan, Lon [1 ]
Rangwala, Sanjida H. [1 ]
Schneider, Valerie A. [1 ]
Skripchenko, Yuri [1 ]
Wang, Jiyao [1 ]
Ye, Jian [1 ]
Trawick, Barton W. [1 ]
Pruitt, Kim D. [1 ]
Sherry, Stephen T. [1 ]
机构
[1] NIH, Natl Ctr Biotechnol Informat, Natl Lib Med, Bldg 38A,8600 Rockville Pike, Bethesda, MD 20894 USA
基金
美国国家卫生研究院;
关键词
D O I
10.1093/nar/gkaa892
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
The National Center for Biotechnology Information (NCBI) provides a large suite of online resources for biological information and data, including the GenBank (R) nucleic acid sequence database and the PubMed (R) database of citations and abstracts published in life science journals. The Entrez system provides search and retrieval operations for most of these data from 34 distinct databases. The E-utilities serve as the programming interface for the Entrez system. Custom implementations of the BLAST program provide sequence-based searching of many specialized datasets. New resources released in the past year include a new PubMed interface and NCBI datasets. Additional resources that were updated in the past year include PMC, Bookshelf, Genome Data Viewer, SRA, ClinVar, dbSNP, dbVar, Pathogen Detection, BLAST, Primer-BLAST, IgBLAST, iCn3D and PubChem. All of these resources can be accessed through the NCBI home page at https://www.ncbi.nlm.nih.gov.
引用
收藏
页码:D10 / D17
页数:8
相关论文
共 50 条
[21]   Database resources of the National Center for Biotechnology Information in 2025 [J].
Sayers, Eric W. ;
Beck, Jeffrey ;
Bolton, Evan E. ;
Brister, J. Rodney ;
Chan, Jessica ;
Connor, Ryan ;
Feldgarden, Michael ;
Fine, Anna M. ;
Funk, Kathryn ;
Hoffman, Jinna ;
Kannan, Sivakumar ;
Kelly, Christopher ;
Klimke, William ;
Kim, Sunghwan ;
Lathrop, Stacy ;
Marchler-Bauer, Aron ;
Murphy, Terence D. ;
O'Sullivan, Chris ;
Schmieder, Erin ;
Skripchenko, Yuriy ;
Stine, Adam ;
Thibaud-Nissen, Francoise ;
Wang, Jiyao ;
Ye, Jian ;
Zellers, Erin ;
Schneider, Valerie A. ;
Pruitt, Kim D. .
NUCLEIC ACIDS RESEARCH, 2024, 53 (D1) :D20-D29
[22]   Database resources of the National Center for Biotechnology Information in 2023 [J].
Sayers, Eric W. ;
Bolton, Evan E. ;
Brister, J. Rodney ;
Canese, Kathi ;
Chan, Jessica ;
Comeau, Donald C. ;
Farrell, Catherine M. ;
Feldgarden, Michael ;
Fine, Anna M. ;
Funk, Kathryn ;
Hatcher, Eneida ;
Kannan, Sivakumar ;
Kelly, Christopher ;
Kim, Sunghwan ;
Klimke, William ;
Landrum, Melissa J. ;
Lathrop, Stacy ;
Lu, Zhiyong ;
Madden, Thomas L. ;
Malheiro, Adriana ;
Marchler-Bauer, Aron ;
Murphy, Terence D. ;
Phan, Lon ;
Pujar, Shashikant ;
Rangwala, Sanjida H. ;
Schneider, Valerie A. ;
Tse, Tony ;
Wang, Jiyao ;
Ye, Jian ;
Trawick, Barton W. ;
Pruitt, Kim D. ;
Sherry, Stephen T. .
NUCLEIC ACIDS RESEARCH, 2023, 51 (D1) :D29-D38
[23]   Database resources of the National Center for Biotechnology Information: 2002 update [J].
Wheeler, DL ;
Church, DM ;
Lash, AE ;
Leipe, DD ;
Madden, TL ;
Pontius, JU ;
Schuler, GD ;
Schriml, LM ;
Tatusova, TA ;
Wagner, L ;
Rapp, BA .
NUCLEIC ACIDS RESEARCH, 2002, 30 (01) :13-16
[24]   Database Resources of the National Center for Biotechnology [J].
Agarwala, Richa ;
Barrett, Tanya ;
Beck, Jeff ;
Benson, Dennis A. ;
Bollin, Colleen ;
Bolton, Evan ;
Bourexis, Devon ;
Brister, J. Rodney ;
Bryant, Stephen H. ;
Canese, Kathi ;
Charowhas, Chad ;
Clark, Karen ;
DiCuccio, Michael ;
Dondoshansky, Ilya ;
Feolo, Michael ;
Funk, Kathryn ;
Geer, Lewis Y. ;
Gorelenkov, Viatcheslav ;
Hlavina, Wratko ;
Hoeppner, Marilu ;
Holmes, Brad ;
Johnson, Mark ;
Khotomlianski, Viatcheslav ;
Kimchi, Avi ;
Kimelman, Michael ;
Kitts, Paul ;
Klimke, William ;
Krasnov, Sergey ;
Kuznetsov, Anatoliy ;
Landrum, Melissa J. ;
Landsman, David ;
Lee, Jennifer M. ;
Lipman, David J. ;
Lu, Zhiyong ;
Madden, Thomas L. ;
Madej, Tom ;
Marchler-Bauer, Aron ;
Karsch-Mizrachi, Ilene ;
Murphy, Terence ;
Orris, Rebecca ;
Ostell, James ;
O'Sullivan, Christopher ;
Palanigobu, Vasuki ;
Panchenko, Anna R. ;
Phan, Lon ;
Pruitt, Kim D. ;
Rodarmer, Kurt ;
Rubinstein, Wendy ;
Sayers, Eric W. ;
Schneider, Valerie .
NUCLEIC ACIDS RESEARCH, 2017, 45 (D1) :D12-D17
[25]   Database resources of the National Center for Biotechnology [J].
Wheeler, DL ;
Church, DM ;
Federhen, S ;
Lash, AE ;
Madden, TL ;
Pontius, JU ;
Schuler, GD ;
Schriml, LM ;
Sequeira, E ;
Tatusova, TA ;
Wagner, L .
NUCLEIC ACIDS RESEARCH, 2003, 31 (01) :28-33
[26]   INFORMATION RESOURCES AT THE NATIONAL-CENTER-FOR-BIOTECHNOLOGY-INFORMATION [J].
WOODSMALL, RM ;
BENSON, DA .
BULLETIN OF THE MEDICAL LIBRARY ASSOCIATION, 1993, 81 (03) :282-284
[27]   Education resources of the National Center for Biotechnology Information [J].
Cooper, Peter S. ;
Lipshultz, Dawn ;
Matten, Wayne T. ;
McGinnis, Scott D. ;
Pechous, Steven ;
Romiti, Monica L. ;
Tao, Tao ;
Valjavec-Gratian, Majda ;
Sayers, Eric W. .
BRIEFINGS IN BIOINFORMATICS, 2010, 11 (06) :563-569
[28]   Plant genome resources at the National Center for Biotechnology Information [J].
Wheeler, DL ;
White, BS ;
Chetvernin, V ;
Resenchuk, S ;
Dombrowski, SM ;
Pechous, SW ;
Tatusova, T ;
Ostell, J .
PLANT PHYSIOLOGY, 2005, 138 (03) :1280-1288
[29]   The National Center for Biotechnology Information's Protein Clusters Database [J].
Klimke, William ;
Agarwala, Richa ;
Badretdin, Azat ;
Chetvernin, Slava ;
Ciufo, Stacy ;
Fedorov, Boris ;
Kiryutin, Boris ;
O'Neill, Kathleen ;
Resch, Wolfgang ;
Resenchuk, Sergei ;
Schafer, Susan ;
Tolstoy, Igor ;
Tatusova, Tatiana .
NUCLEIC ACIDS RESEARCH, 2009, 37 :D216-D223
[30]   Database resources of the National Center for Biotechnology Information (vol 37, pg D5, 2008) [J].
Sayers, Eric W. ;
Barrett, Tanya ;
Benson, Dennis A. ;
Bryant, Stephen H. ;
Canese, Kathi ;
Chetvernin, Vyacheslav ;
Church, Deanna M. ;
DiCuccio, Michael ;
Edgar, Ron ;
Federhen, Scott ;
Feolo, Michael ;
Geer, Lewis Y. ;
Helmberg, Wolfgang ;
Kapustin, Yuri ;
Landsman, David ;
Lipman, David J. ;
Madden, Thomas L. ;
Maglott, Donna R. ;
Miller, Vadim ;
Mizrachi, Ilene ;
Ostell, James ;
Pruitt, Kim D. ;
Schuler, Gregory D. ;
Sequeira, Edwin ;
Sherry, Stephen T. ;
Shumway, Martin ;
Sirotkin, Karl ;
Souvorov, Alexandre ;
Starchenko, Grigory ;
Tatusova, Tatiana A. ;
Wagner, Lukas ;
Yaschenko, Eugene ;
Ye, Jian .
NUCLEIC ACIDS RESEARCH, 2009, 37 (09) :3124-3124