Next generation diagnostic molecular pathology: Critical appraisal of quality assurance in Europe

被引:35
|
作者
Dubbink, Hendrikus J. [1 ]
Deans, Zandra C. [3 ]
Tops, Bastiaan B. J. [2 ]
van Kemenade, Folkert J. [1 ]
Koljenovic, S. [1 ]
van Krieken, Han J. M. [2 ]
Blokx, Willeke A. M. [2 ]
Dinjens, Winand N. M. [1 ]
Groenen, Patricia J. T. A. [2 ]
机构
[1] Univ Med Ctr Rotterdam, Erasmus MC, Dept Pathol, NL-3000 CA Rotterdam, Netherlands
[2] Radboud Univ Nijmegen, Med Ctr, Dept Pathol, NL-6525 ED Nijmegen, Netherlands
[3] Royal Infirm Edinburgh NHS Trust, Dept Lab Med, UK NEQAS Mol Genet, Edinburgh, Midlothian, Scotland
来源
MOLECULAR ONCOLOGY | 2014年 / 8卷 / 04期
关键词
Molecular pathology; Next generation sequencing; Proficiency testing; Quality assessment; Quality assurance; Tumor testing; GASTROINTESTINAL STROMAL TUMOR; LUNG-CANCER; CLINICAL-IMPLICATIONS; COLORECTAL-CANCER; LYNCH SYNDROME; MUTATION; MELANOMA; IMPROVEMENT; ROUNDS; EGFR;
D O I
10.1016/j.molonc.2014.03.004
中图分类号
R73 [肿瘤学];
学科分类号
100214 ;
摘要
Tumor evaluation in pathology is more and more based on a combination of traditional histopathology and molecular analysis. Due to the rapid development of new cancer treatments that specifically target aberrant proteins present in tumor cells, treatment decisions are increasingly based on the molecular features of the tumor. Not only the number of patients eligible for targeted precision medicine, but also the number of molecular targets per patient and tumor type is rising. Diagnostic molecular pathology, the discipline that determines the molecular aberrations present in tumors for diagnostic, prognostic or predictive purposes, is faced with true challenges. The laboratories have to meet the need of comprehensive molecular testing using only limited amount of tumor tissue, mostly fixed in formalin and embedded in paraffin (FFPE), in short turnaround time. Choices must be made for analytical methods that provide accurate, reliable and cost-effective results. Validation of the test procedures and results is essential. In addition, participation and good performance in internal (IQA) and external quality assurance (EQA) schemes is mandatory. In this review, we critically evaluate the validation procedure for comprehensive molecular tests as well as the organization of quality assurance and assessment of competence of diagnostic molecular pathology laboratories within Europe. (C) 2014 Federation of European Biochemical Societies. Published by Elsevier B.V. All rights reserved.
引用
收藏
页码:830 / 839
页数:10
相关论文
共 49 条
  • [1] Next-Generation Sequencing in Diagnostic Pathology
    Ilyas, Mohammad
    PATHOBIOLOGY, 2017, 84 (06) : 292 - 305
  • [2] Endorsing good quality assurance practices in molecular pathology: risks and recommendations for diagnostic laboratories and external quality assessment providers
    Lien Tembuyser
    Elisabeth M. C. Dequeker
    Virchows Archiv, 2016, 468 : 31 - 41
  • [3] Endorsing good quality assurance practices in molecular pathology: risks and recommendations for diagnostic laboratories and external quality assessment providers
    Tembuyser, Lien
    Dequeker, Elisabeth M. C.
    VIRCHOWS ARCHIV, 2016, 468 (01) : 31 - 41
  • [4] Next step of molecular pathology: next-generation sequencing in cytology
    da Silva, Ricella Souza
    Schmitt, Fernando
    JOURNAL OF PATHOLOGY AND TRANSLATIONAL MEDICINE, 2024, 58 (06) : 291 - 298
  • [5] Quality Assurance Measures for Critical Diagnoses in Anatomic Pathology
    Renshaw, Andrew
    Gould, Edwin W.
    AMERICAN JOURNAL OF CLINICAL PATHOLOGY, 2012, 137 (03) : 466 - 469
  • [6] Integration of next-generation sequencing in clinical diagnostic molecular pathology laboratories for analysis of solid tumours; an expert opinion on behalf of IQN Path ASBL
    Deans, Zandra C.
    Costa, Jose Luis
    Cree, Ian
    Dequeker, Els
    Edsjo, Anders
    Henderson, Shirley
    Hummel, Michael
    Ligtenberg, Marjolijn J. L.
    Loddo, Marco
    Machado, Jose Carlos
    Marchetti, Antonio
    Marquis, Katherine
    Mason, Joanne
    Normanno, Nicola
    Rouleau, Etienne
    Schuuring, Ed
    Snelson, Keeda-Marie
    Thunnissen, Erik
    Tops, Bastiaan
    Williams, Gareth
    van Krieken, Han
    Hall, Jacqueline A.
    VIRCHOWS ARCHIV, 2017, 470 (01) : 5 - 20
  • [7] Molecular diagnostic characteristics based on the next generation sequencing in lung cancer and its relationship with the expression of PD-L1
    Liu, Junying
    Liu, Yueping
    PATHOLOGY RESEARCH AND PRACTICE, 2020, 216 (02)
  • [8] Molecular and Morphometric Tools for Next-Generation Pathology Diagnosis of Colon Carcinoma
    Fisher, Yael
    Hershkovitz, Dov
    ISRAEL MEDICAL ASSOCIATION JOURNAL, 2016, 18 (07): : 426 - 432
  • [9] Next-generation sequencing workflows in veterinary infection biology: towards validation and quality assurance
    Van Borm, S.
    Wang, J.
    Granberg, F.
    Colling, A.
    REVUE SCIENTIFIQUE ET TECHNIQUE-OFFICE INTERNATIONAL DES EPIZOOTIES, 2016, 35 (01): : 67 - 81
  • [10] Quality assurance and quality control in the routine molecular diagnostic laboratory for infectious diseases
    Kessler, Harald H.
    Raggam, Reinhard B.
    CLINICAL CHEMISTRY AND LABORATORY MEDICINE, 2012, 50 (07) : 1153 - 1159