Isolation and characterization of polymorphic microsatellite loci from a dinucleotide-enriched genomic library of spotted maigre (Nibea albiflora)

被引：14
|
作者：
Xing, Shichao [1 ,2 ]
Shao, Changwei [1 ]
Liao, Xiaolin [1 ]
Tian, Yongsheng [1 ]
Chen, Songlin [1 ]
机构：
[1] Chinese Acad Fishery Sci, Key Lab Sustainable Utilizat Marine Fisheries Res, Minist Agr, Yellow Sea Fisheries Res Inst, Qingdao 266071, Peoples R China
[2] Ocean Univ China, Coll Marine Life Sci, Qingdao 266003, Peoples R China
来源：
CONSERVATION GENETICS | 2009年 / 10卷 / 03期
关键词：
Spotted maigre; Nibea albiflora; Microsatellite; Enriched genomic library; EST-LIBRARY;
D O I：
10.1007/s10592-008-9663-5
中图分类号：
X176 [生物多样性保护];
学科分类号：
090705 ;
摘要：
In the present study, we reported 13 polymorphic microsatellite loci isolated from a dinucleotide-enriched genomic library of Nibea albiflora. The number of alleles, observed and expected heterozygosity per locus in 44 individuals ranged from 2 to 13, from 0.0909 to 0.9773 and from 0.0886 to 0.9073, respectively. Three loci significantly deviated from Hardy-Weinberg equilibrium after Bonferroni correction. Analysis of linkage disequilibrium showed non-significant among the two pairs of loci. As a result, 13 microsatellite loci probably located on different chromosome pairs and these polymorphic microsatellite loci should provide sufficient level of genetic diversity to investigate the fine-scale population structure and evaluate the breeding strategy in Nibea albiflora.
引用
收藏
页码：789 / 791
页数：3
相关论文
共 50 条
  • [1] Isolation and characterization of polymorphic microsatellite loci from a dinucleotide-enriched genomic library of spotted maigre (Nibea albiflora)
    Shichao Xing
    Changwei Shao
    Xiaolin Liao
    Yongsheng Tian
    Songlin Chen
    Conservation Genetics, 2009, 10 : 789 - 791
  • [2] Isolation and characterization of polymorphic microsatellite loci from a dinucleotide-enriched genomic library of obscure puffer (Takifugu obscurus) and cross-species amplification
    Ma, Hongyu
    Chen, Songlin
    Liao, Xiaolin
    Xu, Tianjun
    Ge, Jiachun
    CONSERVATION GENETICS, 2009, 10 (04) : 955 - 957
  • [3] Isolation and characterization of polymorphic microsatellite loci from a dinucleotide-enriched genomic library of starry flounder (Platichthys stellatus) and cross-species amplification
    Miao, Guidong
    Shao, Changwei
    Ma, Hongyu
    Liao, Xiaolin
    Chen, Songlin
    CONSERVATION GENETICS, 2009, 10 (03) : 631 - 633
  • [4] Isolation and characterization of polymorphic microsatellite loci from a dinucleotide-enriched genomic library of starry flounder (Platichthys stellatus) and cross-species amplification
    Guidong Miao
    Changwei Shao
    Hongyu Ma
    Xiaolin Liao
    Songlin Chen
    Conservation Genetics, 2009, 10 : 631 - 633
  • [5] Isolation and characterization of polymorphic microsatellite loci from a dinucleotide-enriched genomic library of obscure puffer (Takifugu obscurus) and cross-species amplification
    Hongyu Ma
    Songlin Chen
    Xiaolin Liao
    Tianjun Xu
    Jiachun Ge
    Conservation Genetics, 2009, 10 : 955 - 957
  • [6] Twelve polymorphic microsatellite loci from a dinucleotide-enriched genomic library of Japanese Spanish mackerel (Scomberomorus niphonius)
    Xing, Shi-Chao
    Xu, Gen-Bo
    Liao, Xiao-Lin
    Yang, Guan-Pin
    Chen, Song-Lin
    CONSERVATION GENETICS, 2009, 10 (04) : 1167 - 1169
  • [7] Twelve polymorphic microsatellite loci from a dinucleotide-enriched genomic library of Japanese Spanish mackerel (Scomberomorus niphonius)
    Shi-Chao Xing
    Gen-Bo Xu
    Xiao-Lin Liao
    Guan-Pin Yang
    Song-Lin Chen
    Conservation Genetics, 2009, 10 : 1167 - 1169
  • [8] Isolation and characterization of polymorphic microsatellite loci from a dinucleotide-enriched genomic library of seven-band grouper (Epinephelus septemfasciatus) and cross-species amplification
    Lili Zhao
    Changwei Shao
    Xiaolin Liao
    Songlin Chen
    Conservation Genetics, 2009, 10 : 627 - 629
  • [9] Isolation and characterization of polymorphic microsatellite loci from a dinucleotide-enriched genomic library of seven-band grouper (Epinephelus septemfasciatus) and cross-species amplification
    Zhao, Lili
    Shao, Changwei
    Liao, Xiaolin
    Chen, Songlin
    CONSERVATION GENETICS, 2009, 10 (03) : 627 - 629
  • [10] Isolation and characterization of novel microsatellite loci in Nibea albiflora
    Xu, D. D.
    Lou, B.
    Li, S. L.
    Zhang, Y. R.
    Xin, J.
    Zhan, W.
    GENETICS AND MOLECULAR RESEARCH, 2013, 12 (04) : 6156 - 6159
12345