Biology, one molecule at a time

被引:120
作者
Kapanidis, Achillefs N. [1 ]
Strick, Terence [2 ,3 ]
机构
[1] Univ Oxford, Clarendon Lab, Dept Phys & Interdisciplinary Res Collaborat Bion, Oxford OX1 3PU, England
[2] Univ Paris 07, F-75205 Paris 13, France
[3] CNRS, Inst Jacques Monod, UMR 7592, F-75205 Paris 13, France
基金
英国工程与自然科学研究理事会;
关键词
RESONANCE ENERGY-TRANSFER; ALTERNATING-LASER EXCITATION; ATOMIC-FORCE MICROSCOPY; HAND-OVER-HAND; SINGLE-MOLECULE; RNA-POLYMERASE; FLUORESCENCE SPECTROSCOPY; MYOSIN-V; CONFORMATIONAL DYNAMICS; REVERSE-TRANSCRIPTASE;
D O I
10.1016/j.tibs.2009.01.008
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
Single-molecule techniques have moved from being a fascinating curiosity to a highlight of life science research. The single-molecule approach to biology offers distinct advantages over the conventional approach of taking bulk measurements; this additional information content usually comes at the cost of the additional complexity. Popular single-molecule methods include optical and magnetic tweezers, atomic force microscopy, tethered particle motion and single-molecule fluorescence spectroscopy; the complement of these methods offers a wide range of spatial and temporal capabilities. These approaches have been instrumental in addressing important biological questions in diverse areas such as protein-DNA interactions, protein folding and the function(s) of membrane proteins.
引用
收藏
页码:234 / 243
页数:10
相关论文
共 80 条
[1]   Direct observation of base-pair stepping by RNA polymerase [J].
Abbondanzieri, EA ;
Greenleaf, WJ ;
Shaevitz, JW ;
Landick, R ;
Block, SM .
NATURE, 2005, 438 (7067) :460-465
[2]   Dynamic binding orientations direct activity of HIV reverse transcriptase [J].
Abbondanzieri, Elio A. ;
Bokinsky, Gregory ;
Rausch, Jason W. ;
Zhang, Jennifer X. ;
Le Grice, Stuart F. J. ;
Zhuang, Xiaowei .
NATURE, 2008, 453 (7192) :184-U2
[3]   Single-molecule force spectroscopy measurements of bond elongation during a bimolecular reaction [J].
Ainavarapu, Sri Rama Koti ;
Wiita, Arun P. . ;
Dougan, Lorna ;
Uggerud, Einar ;
Fernandez, Julio M. . .
JOURNAL OF THE AMERICAN CHEMICAL SOCIETY, 2008, 130 (20) :6479-6487
[4]   The cell as a collection of protein machines: Preparing the next generation of molecular biologists [J].
Alberts, B .
CELL, 1998, 92 (03) :291-294
[5]   Single-molecule tracking of mRNA exiting from RNA polymerase II [J].
Andrecka, Joanna ;
Lewis, Robert ;
Brueckner, Florian ;
Lehmann, Elisabeth ;
Cramer, Patrick ;
Michaelis, Jens .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 2008, 105 (01) :135-140
[6]   Total internal reflection fluorescence microscopy in cell biology [J].
Axelrod, D .
TRAFFIC, 2001, 2 (11) :764-774
[7]   Multicolor super-resolution imaging with photo-switchable fluorescent probes [J].
Bates, Mark ;
Huang, Bo ;
Dempsey, Graham T. ;
Zhuang, Xiaowei .
SCIENCE, 2007, 317 (5845) :1749-1753
[8]   Imaging intracellular fluorescent proteins at nanometer resolution [J].
Betzig, Eric ;
Patterson, George H. ;
Sougrat, Rachid ;
Lindwasser, O. Wolf ;
Olenych, Scott ;
Bonifacino, Juan S. ;
Davidson, Michael W. ;
Lippincott-Schwartz, Jennifer ;
Hess, Harald F. .
SCIENCE, 2006, 313 (5793) :1642-1645
[9]   tRNA selection and kinetic proofreading in translation [J].
Blanchard, SC ;
Gonzalez, RL ;
Kim, HD ;
Chu, S ;
Puglisi, JD .
NATURE STRUCTURAL & MOLECULAR BIOLOGY, 2004, 11 (10) :1008-1014
[10]   tRNA dynamics on the ribosome during translation [J].
Blanchard, SC ;
Kim, HD ;
Gonzalez, RL ;
Puglisi, JD ;
Chu, S .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 2004, 101 (35) :12893-12898