Segmentation of the Multimodal Brain Tumor Images Used Res-U-Net

被引:3
作者
Sun, Jindong [1 ]
Peng, Yanjun [1 ,2 ]
Li, Dapeng [1 ]
Guo, Yanfei [1 ]
机构
[1] Shandong Univ Sci & Technol, Coll Comp Sci & Engn, Qingdao, Peoples R China
[2] Shandong Prov Key Lab Wisdom Min Informat Technol, Qingdao, Peoples R China
来源
BRAINLESION: GLIOMA, MULTIPLE SCLEROSIS, STROKE AND TRAUMATIC BRAIN INJURIES (BRAINLES 2020), PT I | 2021年 / 12658卷
基金
中国国家自然科学基金;
关键词
Brain tumor segmentation; Deep learning; Magnetic resonance images; NETWORKS;
D O I
10.1007/978-3-030-72084-1_24
中图分类号
TP18 [人工智能理论];
学科分类号
081104 ; 0812 ; 0835 ; 1405 ;
摘要
Gliomas are the most common brain tumors, which have a high mortality. Magnetic resonance imaging (MRI) is useful to assess gliomas, in which segmentation of multimodal brain tissues in 3D medical images is of great significance for brain diagnosis. Due to manual job for segmentation is time-consuming, an automated and accurate segmentation method is required. How to segment multimodal brain accurately is still a challenging task. To address this problem, we employ residual neural blocks and a U-Net architecture to build a novel network. We have evaluated the performances of different primary residual neural blocks in building U-Net. Our proposed method was evaluated on the validation set of BraTS 2020, in which our model makes an effective segmentation for the complete, core and enhancing tumor regions in Dice Similarity Coefficient (DSC) metric (0.89, 0.78, 0.72). And in testing set, our model got the DSC results of 0.87, 0.82, 0.80. Residual convolutional block is especially useful to improve performance in building model. Our proposed method is inherently general and is a powerful tool to studies of medical images of brain tumors.
引用
收藏
页码:263 / 273
页数:11
相关论文
共 21 条
[1]  
Bakas S, 2017, CANC IMAGING ARCH, V2017
[2]  
Bakas S, 2019, Arxiv, DOI [arXiv:1811.02629, DOI 10.48550/ARXIV.1811.02629]
[3]  
Bakas Spyridon, 2017, TCIA
[4]   Data Descriptor: Advancing The Cancer Genome Atlas glioma MRI collections with expert segmentation labels and radiomic features [J].
Bakas, Spyridon ;
Akbari, Hamed ;
Sotiras, Aristeidis ;
Bilello, Michel ;
Rozycki, Martin ;
Kirby, Justin S. ;
Freymann, John B. ;
Farahani, Keyvan ;
Davatzikos, Christos .
SCIENTIFIC DATA, 2017, 4
[5]   A survey of MRI-based medical image analysis for brain tumor studies [J].
Bauer, Stefan ;
Wiest, Roland ;
Nolte, Lutz-P ;
Reyes, Mauricio .
PHYSICS IN MEDICINE AND BIOLOGY, 2013, 58 (13) :R97-R129
[6]  
Bauer S, 2011, LECT NOTES COMPUT SC, V6893, P354, DOI 10.1007/978-3-642-23626-6_44
[7]  
Cicek Ozgun, 2016, Medical Image Computing and Computer-Assisted Intervention - MICCAI 2016. 19th International Conference. Proceedings: LNCS 9901, P424, DOI 10.1007/978-3-319-46723-8_49
[8]   A multi-path adaptive fusion network for multimodal brain tumor segmentation [J].
Ding, Yi ;
Gong, Linpeng ;
Zhang, Mingfeng ;
Li, Chang ;
Qin, Zhiguang .
NEUROCOMPUTING, 2020, 412 :19-30
[9]   Automatic Brain Tumor Detection and Segmentation Using U-Net Based Fully Convolutional Networks [J].
Dong, Hao ;
Yang, Guang ;
Liu, Fangde ;
Mo, Yuanhan ;
Guo, Yike .
MEDICAL IMAGE UNDERSTANDING AND ANALYSIS (MIUA 2017), 2017, 723 :506-517
[10]  
Fan Xu, 2019, 2019 IEEE 4th International Conference on Image, Vision and Computing (ICIVC), P236, DOI 10.1109/ICIVC47709.2019.8981027