Human Fibroblasts for Large-Scale "Omics" Investigations of ATM Gene Function

被引:8
作者
Jung, Mira [1 ]
Timofeeva, Olga [2 ]
Cheema, Amrita K. [2 ]
Varghese, Rency [2 ]
Ressom, Habtom [2 ]
Dritschilo, Anatoly [1 ,2 ,3 ]
机构
[1] Georgetown Univ, Med Ctr, Dept Radiat Med, Lombardi Comprehens Canc Ctr, Washington, DC 20057 USA
[2] Georgetown Univ, Med Ctr, Dept Oncol, Lombardi Comprehens Canc Ctr, Washington, DC 20057 USA
[3] Georgetown Univ, Med Ctr, Dept Radiat Med, Lombardi Comprehens Canc Ctr, Washington, DC 20057 USA
来源
HUMAN CELL TRANSFORMATION: ROLE OF STEM CELLS AND THE MICROENVIRONMENT | 2012年 / 720卷
关键词
ATAXIA-TELANGIECTASIA; RADIATION SENSITIVITY; KINASES; CELLS;
D O I
10.1007/978-1-4614-0254-1_15
中图分类号
R73 [肿瘤学];
学科分类号
100214 ;
摘要
ATM (gene mutated in ataxia-telangiectasia) is a critical central component of the pleiotropic responses of cells to ionizing radiation-induced stress. To gain insight into molecular mechanisms and to enhance our understanding of ATM functions, we have advanced a human model cell system, derived from genetically defined immortal fibroblasts, and we have applied high-throughput genomic, proteomic and metabolomic technologies for a systems level analysis. The cellular characterizations reported here provide the background for application of a systems analysis to integrate transcription, post-translational modifications and metabolic activity induced by exposure of cells to ionizing radiation. We present here a summary of the derivation and characterization of cells comprising this model cell system and review applications of this model to systems analysis of ATM functions.
引用
收藏
页码:181 / 190
页数:10
相关论文
共 13 条
[1]   COMPUTER-PROGRAMS FOR THE ANALYSIS OF CELLULAR-SURVIVAL DATA [J].
ALBRIGHT, N .
RADIATION RESEARCH, 1987, 112 (02) :331-340
[2]  
BODER E, 1958, PEDIATRICS, V21, P526
[3]  
Cheema AK, 2011, FUNCTIONAL PRO UNPUB
[4]   Integrated Analysis of ATM Mediated Gene and Protein Expression Impacting Cellular Metabolism [J].
Cheema, Amrita K. ;
Timofeeva, Olga ;
Varghese, Rency ;
Dimtchev, Alexandre ;
Shiekh, Kathryn ;
Shulaev, Vladimir ;
Suy, Simeng ;
Collins, Sean ;
Ressom, Habtom ;
Jung, Mira ;
Dritschilo, Anatoly .
JOURNAL OF PROTEOME RESEARCH, 2011, 10 (05) :2651-2657
[5]   Stable siRNA-mediated silencing of ATM alters the transcriptional profile of HeLa cells [J].
Chen, SJ ;
Wang, G ;
Makrigiorgos, GM ;
Price, BD .
BIOCHEMICAL AND BIOPHYSICAL RESEARCH COMMUNICATIONS, 2004, 317 (04) :1037-1044
[6]   Ataxia-telangiectasia, an evolving phenotype [J].
Chun, HH ;
Gatti, RA .
DNA REPAIR, 2004, 3 (8-9) :1187-1196
[7]  
Hu Zhang-Zhi, 2008, J Proteomics Bioinform, V1, P47
[8]   CORRECTION OF RADIATION SENSITIVITY IN ATAXIA-TELANGIECTASIA CELLS BY A TRUNCATED I-KAPPA-B-ALPHA [J].
JUNG, M ;
ZHANG, Y ;
LEE, S ;
DRITSCHILO, A .
SCIENCE, 1995, 268 (5217) :1619-1621
[9]   Impaired ionizing radiation-induced activation of a nuclear signal essential for phosphorylation of c-Jun by dually phosphorylated c-Jun amino-terminal kinases in ataxia telangiectasia fibroblasts [J].
Lee, SA ;
Dritschilo, A ;
Jung, M .
JOURNAL OF BIOLOGICAL CHEMISTRY, 1998, 273 (49) :32889-32894
[10]   A SINGLE ATAXIA-TELANGIECTASIA GENE WITH A PRODUCT SIMILAR TO PI-3 KINASE [J].
SAVITSKY, K ;
BARSHIRA, A ;
GILAD, S ;
ROTMAN, G ;
ZIV, Y ;
VANAGAITE, L ;
TAGLE, DA ;
SMITH, S ;
UZIEL, T ;
SFEZ, S ;
ASHKENAZI, M ;
PECKER, I ;
FRYDMAN, M ;
HARNIK, R ;
PATANJALI, SR ;
SIMMONS, A ;
CLINES, GA ;
SARTIEL, A ;
GATTI, RA ;
CHESSA, L ;
SANAL, O ;
LAVIN, MF ;
JASPERS, NGJ ;
MALCOLM, A ;
TAYLOR, R ;
ARLETT, CF ;
MIKI, T ;
WEISSMAN, SM ;
LOVETT, M ;
COLLINS, FS ;
SHILOH, Y .
SCIENCE, 1995, 268 (5218) :1749-1753