Prognostic value of immune-related genes in laryngeal squamous cell carcinoma

被引:1
|
作者
Liu, Weixing [1 ]
Zhang, Chunyi [1 ]
Gong, Xin [1 ]
Liao, Wenjing [1 ]
Xu, Jun [1 ]
Zhang, Xiaowen [1 ]
机构
[1] Guangzhou Med Univ, Affiliated Hosp 1, Dept Otolaryngol Head & Neck Surg, State Key Lab Resp Dis, 151 Yanliangxi Rd, Guangzhou 510120, Guangdong, Peoples R China
关键词
Laryngeal squamous cell carcinoma (LSCC); bioinformatics analyses; immune genes; prognostic model; markers; PATTERN-RECOGNITION RECEPTORS; CANCER; HEAD; SIGNATURE; RECURRENT; IDENTIFICATION; EXPRESSION; FOXP3; ETF1;
D O I
10.21037/tcr-20-2173
中图分类号
R73 [肿瘤学];
学科分类号
100214 ;
摘要
Background: Laryngeal squamous cell carcinoma (LSCC) is a very common cancer in head and neck. A large amount of evidence indicated that immune genes take a non-negligible part in the occurrence and development of LSCC. We aimed to evaluate the prognostic value of the immune-related genes (IRGs) in LSCC. Methods: We analyzed the expression profiles of IRGs and clinical information of patients from The Cancer Genome Atlas (TCGA) dataset, including 114 LSCC and 12 non-tumor tissues. The uncover molecular mechanisms of these survival-associated IRGs (SAIRGs) were explored by the bioinformatics analyses. A novel prognostic model based on IRGs was developed through multivariate Cox regression. Results: Twenty-seven differentially expressed SAIRGs in LSCC patients. Copy number alterations, proteinprotein interaction (PPI) network, transcription factors (TFs) regulate network were used to identify molecular characteristics of these IRGs. We established an IRGs (TLR2, -YCL2, CYSLTR2 and FCGR3B) based prognostic model (IRGPM), which had good performance to predict the prognosis of LSCC (AUC =0.820, P<0.05). Further analysis, we found the IRGPM can reflect the infiltration of several immune cells. Conclusions: IRGs have a potential role in the occurrence and development of LSCC, and the IRGPM can predict the overall survival rate of LSCC.
引用
收藏
页码:6287 / +
页数:17
相关论文
共 50 条
  • [31] Identification of Immune-Related Risk Signatures for the Prognostic Prediction in Oral Squamous Cell Carcinoma
    Zou, Chen
    Huang, Dahong
    Wei, Haigang
    Wu, Siyuan
    Song, Jing
    Tang, Zhe
    Li, Xia
    Ai, Yilong
    JOURNAL OF IMMUNOLOGY RESEARCH, 2021, 2021
  • [32] Identification and Validation of a Prognostic Immune-Related Gene Signature in Esophageal Squamous Cell Carcinoma
    Xiong, Kai
    Tao, Ziyou
    Zhang, Zeyang
    Wang, Jianyao
    Zhang, Peng
    FRONTIERS IN BIOENGINEERING AND BIOTECHNOLOGY, 2022, 10
  • [33] Identification of the Prognostic Value of Immune-Related Genes in Esophageal Cancer
    Guo, Xiong
    Wang, Yujun
    Zhang, Han
    Qin, Chuan
    Cheng, Anqi
    Liu, Jianjun
    Dai, Xinglong
    Wang, Ziwei
    FRONTIERS IN GENETICS, 2020, 11
  • [34] An immune-related lncRNA pairs signature to identify the prognosis and predict the immune landscape of laryngeal squamous cell carcinoma
    Qian, Lvsheng
    Ni, Tingting
    Fei, Bing
    Sun, Hui
    Ni, Haosheng
    BMC CANCER, 2022, 22 (01)
  • [35] An immune-related lncRNA pairs signature to identify the prognosis and predict the immune landscape of laryngeal squamous cell carcinoma
    Lvsheng Qian
    Tingting Ni
    Bing Fei
    Hui Sun
    Haosheng Ni
    BMC Cancer, 22
  • [36] The prognostic value of tumor budding in laryngeal squamous cell carcinoma
    Zhang, Heng
    Sheng, Xiaoli
    Zhang, Siyi
    Gu, Xia
    TRANSLATIONAL CANCER RESEARCH, 2020, 9 (01) : 119 - 127
  • [37] Prognostic value of intratumoral Fusobacterium nucleatum and association with immune-related gene expression in oral squamous cell carcinoma patients
    Neuzillet, Cindy
    Marchais, Manon
    Vacher, Sophie
    Hilmi, Marc
    Schnitzler, Anne
    Meseure, Didier
    Leclere, Renaud
    Lecerf, Charlotte
    Dubot, Coraline
    Jeannot, Emmanuelle
    Klijanienko, Jerzy
    Mariani, Odette
    Calugaru, Valentin
    Hoffmann, Caroline
    Lesnik, Maria
    Badois, Nathalie
    Borcoman, Edith
    Piaggio, Eliane
    Kamal, Maud
    Le Tourneau, Christophe
    Bieche, Ivan
    SCIENTIFIC REPORTS, 2021, 11 (01)
  • [38] Prognostic value of intratumoral Fusobacterium nucleatum and association with immune-related gene expression in oral squamous cell carcinoma patients
    Cindy Neuzillet
    Manon Marchais
    Sophie Vacher
    Marc Hilmi
    Anne Schnitzler
    Didier Meseure
    Renaud Leclere
    Charlotte Lecerf
    Coraline Dubot
    Emmanuelle Jeannot
    Jerzy Klijanienko
    Odette Mariani
    Valentin Calugaru
    Caroline Hoffmann
    Maria Lesnik
    Nathalie Badois
    Edith Borcoman
    Eliane Piaggio
    Maud Kamal
    Christophe Le Tourneau
    Ivan Bieche
    Scientific Reports, 11
  • [39] Prognostic model of immune-related genes for patients with hepatocellular carcinoma
    Cai, Qun
    Duan, Jinnan
    Ding, Liang
    FRONTIERS IN SURGERY, 2022, 9
  • [40] Deciphering the value of anoikis-related genes in prognosis, immune microenvironment, and drug sensitivity of laryngeal squamous cell carcinoma
    Wang, Cheng
    Gao, Ge
    Che, Qin
    Zheng, Shikang
    Yang, Ying
    Li, Tian
    Zhai, Xingyou
    Lu, Yuehao
    Huang, Bangqing
    Yu, Ting
    Zhao, Kai
    Liu, Mingbo
    PATHOLOGY RESEARCH AND PRACTICE, 2025, 268