A GH115 α-glucuronidase from Schizophyllum commune contributes to the synergistic enzymatic deconstruction of softwood glucuronoarabinoxylan

被引:69
作者
McKee, Lauren S. [1 ]
Sunner, Hampus [2 ]
Anasontzis, George E. [2 ]
Toriz, Guillermo [3 ,4 ]
Gatenholm, Paul [3 ]
Bulone, Vincent [1 ,5 ,6 ]
Vilaplana, Francisco [1 ]
Olsson, Lisbeth [2 ]
机构
[1] AlbaNova Univ Ctr, KTH Royal Inst Technol, Sch Biotechnol, Wallenberg Wood Sci Ctr,Div Glycosci, S-10691 Stockholm, Sweden
[2] Chalmers Univ Technol, Dept Biol & Biol Engn, Wallenberg Wood Sci Ctr, Div Ind Biotechnol, S-41296 Gothenburg, Sweden
[3] Chalmers Univ Technol, Dept Chem & Chem Engn, Wallenberg Wood Sci Ctr, S-41296 Gothenburg, Sweden
[4] Univ Guadalajara, Dept Wood Cellulose & Paper Res, Guadalajara, Mexico
[5] Univ Adelaide, ARC Ctr Excellence Plant Cell Walls, Urrbrae, SA 5064, Australia
[6] Univ Adelaide, Sch Agr Food & Wine, Urrbrae, SA 5064, Australia
基金
瑞典研究理事会;
关键词
Lignocellulosic biomass; Glucuronoarabinoxylan; Glycoside hydrolases (GH); alpha-Glucuronidase; Agu115; PLANT-CELL WALL; WHEAT ARABINOXYLAN; STRUCTURAL BASIS; BETA-XYLOSIDASE; XYLAN; ARABINOFURANOSIDASES; HYDROLYSIS; SUBSTRATE; ETHANOL; ENZYMES;
D O I
10.1186/s13068-015-0417-6
中图分类号
Q81 [生物工程学(生物技术)]; Q93 [微生物学];
学科分类号
071005 ; 0836 ; 090102 ; 100705 ;
摘要
Background: Lignocellulosic biomass from softwood represents a valuable resource for the production of biofuels and bio-based materials as alternatives to traditional pulp and paper products. Hemicelluloses constitute an extremely heterogeneous fraction of the plant cell wall, as their molecular structures involve multiple monosaccharide components, glycosidic linkages, and decoration patterns. The complete enzymatic hydrolysis of wood hemicelluloses into monosaccharides is therefore a complex biochemical process that requires the activities of multiple degradative enzymes with complementary activities tailored to the structural features of a particular substrate. Glucuronoarabinoxylan (GAX) is a major hemicellulose component in softwood, and its structural complexity requires more enzyme specificities to achieve complete hydrolysis compared to glucuronoxylans from hardwood and arabinoxylans from grasses. Results: We report the characterisation of a recombinant alpha-glucuronidase (Agu115) from Schizophyllum commune capable of removing (4-O-methyl)-glucuronic acid ((Me) GlcA) residues from polymeric and oligomeric xylan. The enzyme is required for the complete deconstruction of spruce glucuronoarabinoxylan (GAX) and acts synergistically with other xylan-degrading enzymes, specifically a xylanase (Xyn10C), an alpha-l-arabinofuranosidase (AbfA), and a beta-xylosidase (XynB). Each enzyme in this mixture showed varying degrees of potentiation by the other activities, likely due to increased physical access to their respective target monosaccharides. The exo-acting Agu115 and AbfA were unable to remove all of their respective target side chain decorations from GAX, but their specific activity was significantly boosted by the addition of the endo-Xyn10C xylanase. We demonstrate that the proposed enzymatic cocktail (Agu115 with AbfA, Xyn10C and XynB) achieved almost complete conversion of GAX to arabinofuranose (Araf), xylopyranose (Xylp), and MeGlcA monosaccharides. Addition of Agu115 to the enzymatic cocktail contributes specifically to 25 % of the conversion. However, traces of residual oligosaccharides resistant to this combination of enzymes were still present after deconstruction, due to steric hindrances to enzyme access to the substrate. Conclusions: Our GH115 alpha-glucuronidase is capable of finely tailoring the molecular structure of softwood GAX, and contributes to the almost complete saccharification of GAX in synergy with other exo- and endo-xylan-acting enzymes. This has great relevance for the cost-efficient production of biofuels from softwood lignocellulose.
引用
收藏
页数:13
相关论文
共 47 条
[21]   Structural differences of xylans affect their interaction with cellulose [J].
Kabel, Mirjam A. ;
van den Borne, Hein ;
Vincken, Jean-Paul ;
Voragen, Alphons G. J. ;
Schols, Henk A. .
CARBOHYDRATE POLYMERS, 2007, 69 (01) :94-105
[22]   Construction of a xylan-fermenting yeast strain through codisplay of xylanolytic enzymes on the surface of xylose-utilizing Saccharomyces cerevisiae cells [J].
Katahira, S ;
Fujita, Y ;
Mizuike, A ;
Fukuda, H ;
Kondo, A .
APPLIED AND ENVIRONMENTAL MICROBIOLOGY, 2004, 70 (09) :5407-5414
[23]   Combined substrate, enzyme and yeast feed in simultaneous saccharification and fermentation allow bioethanol production from pretreated spruce biomass at high solids loadings [J].
Koppram, Rakesh ;
Olsson, Lisbeth .
BIOTECHNOLOGY FOR BIOFUELS, 2014, 7
[24]   Lignocellulosic ethanol production at high-gravity: challenges and perspectives [J].
Koppram, Rakesh ;
Tomas-Pejo, Ella ;
Xiros, Charilaos ;
Olsson, Lisbeth .
TRENDS IN BIOTECHNOLOGY, 2014, 32 (01) :46-53
[25]   Optimization of simultaneous saccharification and fermentation for the production of ethanol from lignocellulosic biomass [J].
Krishna, SH ;
Chowdary, GV .
JOURNAL OF AGRICULTURAL AND FOOD CHEMISTRY, 2000, 48 (05) :1971-1976
[26]   Mechanism of assembly of xylan onto cellulose surfaces [J].
Linder, A ;
Bergman, R ;
Bodin, A ;
Gatenholm, P .
LANGMUIR, 2003, 19 (12) :5072-5077
[27]   The carbohydrate-active enzymes database (CAZy) in 2013 [J].
Lombard, Vincent ;
Ramulu, Hemalatha Golaconda ;
Drula, Elodie ;
Coutinho, Pedro M. ;
Henrissat, Bernard .
NUCLEIC ACIDS RESEARCH, 2014, 42 (D1) :D490-D495
[28]   Introducing endo-xylanase activity into an exo-acting arabinofuranosidase that targets side chains [J].
McKee, Lauren S. ;
Pena, Maria J. ;
Rogowski, Artur ;
Jackson, Adam ;
Lewis, Richard J. ;
York, William S. ;
Krogh, Kristian B. R. M. ;
Vikso-Nielsen, Anders ;
Skjot, Michael ;
Gilbert, Harry J. ;
Marles-Wright, Jon .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 2012, 109 (17) :6537-6542
[29]   Absence of branches from xylan in Arabidopsis gux mutants reveals potential for simplification of lignocellulosic biomass [J].
Mortimer, Jennifer C. ;
Miles, Godfrey P. ;
Brown, David M. ;
Zhang, Zhinong ;
Segura, Marcelo P. ;
Weimar, Thilo ;
Yu, Xiaolan ;
Seffen, Keith A. ;
Stephens, Elaine ;
Turner, Simon R. ;
Dupree, Paul .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 2010, 107 (40) :17409-17414
[30]   The membrane-bound α-glucuronidase from Pseudomonas cellulosa hydrolyzes 4-O-methyl-D-glucuronoxylooligosaccharides but not 4-O-methyl-D-glucuronoxylan [J].
Nagy, T ;
Emami, K ;
Fontes, CMGA ;
Ferreira, LMA ;
Humphry, DR ;
Gilbert, HJ .
JOURNAL OF BACTERIOLOGY, 2002, 184 (17) :4925-4929