A dataset of egg size and shape from more than 6,700 insect species

被引:30
作者
Church, Samuel H. [1 ]
Donoughe, Seth [1 ,2 ]
de Medeiros, Bruno A. S. [1 ]
Extavour, Cassandra G. [1 ,3 ]
机构
[1] Harvard Univ, Dept Organism & Evolutionary Biol, Cambridge, MA 02138 USA
[2] Univ Chicago, Dept Mol Genet & Cell Biol, 920 E 58Th St, Chicago, IL 60637 USA
[3] Harvard Univ, Dept Mol & Cellular Biol, Cambridge, MA 02138 USA
基金
美国国家科学基金会;
关键词
LEPIDOPTERA; NOCTUIDAE; ALLOMETRY; NUMBER;
D O I
10.1038/s41597-019-0049-y
中图分类号
O [数理科学和化学]; P [天文学、地球科学]; Q [生物科学]; N [自然科学总论];
学科分类号
07 ; 0710 ; 09 ;
摘要
Offspring size is a fundamental trait in disparate biological fields of study. This trait can be measured as the size of plant seeds, animal eggs, or live young, and it influences ecological interactions, organism fitness, maternal investment, and embryonic development. Although multiple evolutionary processes have been predicted to drive the evolution of offspring size, the phylogenetic distribution of this trait remains poorly understood, due to the difficulty of reliably collecting and comparing offspring size data from many species. Here we present a dataset of 10,449 morphological descriptions of insect eggs, with records for 6,706 unique insect species and representatives from every extant hexapod order. The dataset includes eggs whose volumes span more than eight orders of magnitude. We created this dataset by partially automating the extraction of egg traits from the primary literature. In the process, we overcame challenges associated with large- scale phenotyping by designing and employing custom bioinformatic solutions to common problems. We matched the taxa in this dataset to the currently accepted scientific names in taxonomic and genetic databases, which will facilitate the use of these data for testing pressing evolutionary hypotheses in offspring size evolution.
引用
收藏
页数:11
相关论文
共 34 条
[1]  
[Anonymous], 2017, R LANG ENV STAT COMP
[2]  
[Anonymous], GBIF GLOB BIOD INF F
[3]  
Bernardo J, 1996, AM ZOOL, V36, P216
[4]   THE ALLOMETRY OF EGG SIZE AND NUMBER IN INSECTS [J].
BERRIGAN, D .
OIKOS, 1991, 60 (03) :313-321
[5]  
Blackburn T. M., 1990, THESIS
[6]  
Chaves Luis Fernando, 2003, Entomotropica, V18, P83
[7]   Insect egg size and shape evolve with ecology but not developmental rate [J].
Church, Samuel H. ;
Donoughe, Seth ;
de Medeiros, Bruno A. S. ;
Extavour, Cassandra G. .
NATURE, 2019, 571 (7763) :58-+
[8]   EGGS OF STICK INSECTS (PHASMIDA) - REVIEW WITH DESCRIPTIONS OF EGGS OF 11 SPECIES [J].
CLARK, JT .
SYSTEMATIC ENTOMOLOGY, 1976, 1 (02) :95-105
[9]   Evolutionary Characters, Phenotypes and Ontologies: Curating Data from the Systematic Biology Literature [J].
Dahdul, Wasila M. ;
Balhoff, James P. ;
Engeman, Jeffrey ;
Grande, Terry ;
Hilton, Eric J. ;
Kothari, Cartik ;
Lapp, Hilmar ;
Lundberg, John G. ;
Midford, Peter E. ;
Vision, Todd J. ;
Westerfield, Monte ;
Mabee, Paula M. .
PLOS ONE, 2010, 5 (05)
[10]   Development of Trichogramma australicum Girault (Hymenoptera: Trichogrammatidae) in eggs of Helicoverpa armigera (Hubner) (Lepidoptera: Noctuidae) and in artificial diet [J].
Dahlan, AN ;
Gordh, G .
AUSTRALIAN JOURNAL OF ENTOMOLOGY, 1998, 37 :254-264